Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01580 ATGAGTGAGGAGCATAAGAGAGAGCCATCGGAGGAAAAAAAATACTATAAAGATTGTCCTGGTTGTAAGGTGGAACAATCCAAAGAGCTCAATCAAGGGGTATCCAATACAAATCTTTTCATCATATGGATGGTGGTGTTATGTTCAACACTGCCTGCATCATCACTCTTTCCATTCCTTTATTTCATGATTAGAGATTTTAAACTTGCAAAAGACGAGACTGATATTAGTTACTATGCCGGCTATGTAGGGTCATCATTCATGCTTGGAAGAACCTTGACATCTGTATTATGGGGAATGATTTCTGATCGCTATGGTCGAAAACCTGTTATAATTTTTGGCGTTTTTGTAGTTGTAGTTTTCAACACATTATTTGGCATAAGTACAAGTTTCTGGATGGCTGTTATCACAAGATTTCTTCTGGGATGTTTAATTGGTGCAGTTGGACCAGTAAAGGCTTATGCTATTGAACTTGTTCGAGAAGAACACCAAGCTCTTGGACTCTCTACTGTAACATTGGGAGGCTATTTGGCTCAGCCAGCAGAGAAATATCCACATATATTTCCAAAGGGTTCCTTCTTGGATAAGTTTCCTTATGTCTTGCCGTGCTTTGTAATATCAGGAGTTTCATTGGTAGTAGTTCTTGCCTGCTTGTGGATTCCGGAAACACTTCACAATCACAACGGCAGCAATGCTGATGAGTCTGATGATACTGAAGCTATAGAAAATGGAATCAACAAGGTTGATAAAGAAAAGACGGTTCAAAAAAAAGAAAATCTCTTTTTGAATTGGCCATTAATGTCATCTATCATTGCTTATTGTGTCTTCTCACTTCATGATATTGCATATCAAGAGGTTTTCTCTTTGTGGTGTGTTAGTCCTCCAAGTCTAGGAGGTTTGAACTTCTCAACTAATGATGTTGGTAATGTTCTTGCAATTTCAGGTATAGCACTTGTGATCTACCAACTTACCCTATACCAATATATTGCAAAAGCTAGTGGACCTGTTGGCATTGCAAGAATCACAGGGATATTTTCTATACCACTTTTGCAAAGTTACCCCTTCATAGCAATGTTGTCAGGCATAACCTTATACATAGTCATTAGTATTGCTTCCATCCTCAAGAATATTATCTCAGTGACGATTACAACGGGTTTATTCCTTATACAAAATCGAGCAGTGGAACAACACCAAAGAGGGGCAGCTAATGGAATTTCCCTGACAGCTATGTCTCTATTCAAAGCTATTGGCCCTGCTGCTGGTGGTACAATATTAACTTGGTCGCAAAAGCGTCTGCATGCTTTTCTCCCGGGCACCCACATGGTGTTTTTCTTCCTAAATTTAGTTGAAGTACTAGGTATACTTATGATGTTCAAACCATTCCTCGGAGAGAAGAAGAAAACACATTCAGATCAGTTGCAATGA 1425 0.3888 MSEEHKREPSEEKKYYKDCPGCKVEQSKELNQGVSNTNLFIIWMVVLCSTLPASSLFPFLYFMIRDFKLAKDETDISYYAGYVGSSFMLGRTLTSVLWGMISDRYGRKPVIIFGVFVVVVFNTLFGISTSFWMAVITRFLLGCLIGAVGPVKAYAIELVREEHQALGLSTVTLGGYLAQPAEKYPHIFPKGSFLDKFPYVLPCFVISGVSLVVVLACLWIPETLHNHNGSNADESDDTEAIENGINKVDKEKTVQKKENLFLNWPLMSSIIAYCVFSLHDIAYQEVFSLWCVSPPSLGGLNFSTNDVGNVLAISGIALVIYQLTLYQYIAKASGPVGIARITGIFSIPLLQSYPFIAMLSGITLYIVISIASILKNIISVTITTGLFLIQNRAVEQHQRGAANGISLTAMSLFKAIGPAAGGTILTWSQKRLHAFLPGTHMVFFFLNLVEVLGILMMFKPFLGEKKKTHSDQLQ 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01580 474 SUPERFAMILY MFS general substrate transporter 36 468 IPR036259 -
Trre15g01580 474 CDD MFS_SLC46_TetA_like 42 459 - -
Trre15g01580 474 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 36 458 - -
Trre15g01580 474 Gene3D MFS general substrate transporter like domains 34 456 IPR036259 -
Trre15g01580 474 ProSiteProfiles Major facilitator superfamily (MFS) profile. 38 465 IPR020846 GO:0022857
Trre15g01580 474 Pfam Major Facilitator Superfamily 42 418 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01580 Trre-Chr15 12675601 12682443 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01580 15 12675601 12682443 Trre15g01580 15 12675601 12682443 ECH