Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01530 ATGACACCGACTTCTTCTTCATTTCCAATCTCATCTCTTCTTTCTTTCTCATTCTTCTTCTTCGCCATCTTCACTTTTCTAGAATCTTCTGCAGATTGTTCCCAATTCGATCACGCGCCAATGACTACCTTATGCGGAGGCATTCACGATTCACATAGCTCTCAAAATTCCGCTGAAATTGAATCCCTTGCTCGATTCGCTGTTGATCAACATAATACCAAACAGAATTCACTTCTGGAGTTTGCACGGGTGGTGAAAGCACGTGAGCAGGTTGTTGCTGGTACACTTCATCATCTTACTCTCGAGGCTATTGATGGGGGTGAGAAGAAGATCTATGAAGCCAAAGTCTGGGTCAAACCCTGGCTGAACTTTAAAGAACTTCAAGAGTTCAAACATGCTGGTGATGGTGGTGCTCCATCATTTACCTCTGCAGATCTTGGTGTGCTAAAGGATGGCCACAAGCCAGGGTGGCAGTCTGTGCCAACACATGACCCTCAAGTTCAGGATGCAGCAAATCATGCTATCAAGTCCATTCAGCAGAGGTCAAATTCACTACTGCCCTATGAGCTCCATGAGGTTGCTGATGCAAAGGCTGAGGTCAACGATGATGTTGCTAAGTTTAATTTGCTTCTCAAGGTCAAGCGTGGAGAGAAGGAAGAGAAGTTCAAGGTAGAGGTGCACAAGAATAATGAGGGTAGTTTCCGTCTTAATCAGATGGAAGTCGATCATTCCTAA 735 0.4476 MTPTSSSFPISSLLSFSFFFFAIFTFLESSADCSQFDHAPMTTLCGGIHDSHSSQNSAEIESLARFAVDQHNTKQNSLLEFARVVKAREQVVAGTLHHLTLEAIDGGEKKIYEAKVWVKPWLNFKELQEFKHAGDGGAPSFTSADLGVLKDGHKPGWQSVPTHDPQVQDAANHAIKSIQQRSNSLLPYELHEVADAKAEVNDDVAKFNLLLKVKRGEKEEKFKVEVHKNNEGSFRLNQMEVDHS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01530 244 Gene3D - 155 242 - -
Trre15g01530 244 FunFam Cysteine proteinase inhibitor 154 243 - -
Trre15g01530 244 SMART CY_4 43 133 IPR000010 GO:0004869
Trre15g01530 244 Pfam Aspartic acid proteinase inhibitor 57 132 IPR000010 GO:0004869
Trre15g01530 244 ProSitePatterns Cysteine proteases inhibitors signature. 89 102 IPR018073 -
Trre15g01530 244 FunFam Cysteine proteinase inhibitor 41 141 - -
Trre15g01530 244 SUPERFAMILY Cystatin/monellin 152 238 IPR046350 -
Trre15g01530 244 CDD CY 46 132 IPR000010 GO:0004869
Trre15g01530 244 PANTHER CYSTATIN FAMILY MEMBER 38 192 IPR027214 GO:0004869
Trre15g01530 244 SUPERFAMILY Cystatin/monellin 41 134 IPR046350 -
Trre15g01530 244 Gene3D - 41 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01530 Trre-Chr15 12154233 12157723 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01530 15 12154233 12157723 Trre15g01530 15 12154233 12157723 ECH