Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01529 ATGGCGTCCACACCTCCTTCCATTTCTCCTTCTCGCACCACCTGTGCTTCTCTCCTCCGTCAATTGCAGATGATATGGGATGAGATTGGGGAGAGTGACACTGATAGAGACAATATGCTTCTTCAACTGGAGCAAGAGTGTCTTGACATTTATCACAAAAAGGTTGAGCAAACCAGAAAGCACAAAGCTGACTTGTTTAAGTGGTTGGCTGATGCTGAATCTGAAGTCACCAATATTGCTTCTTCTCTTGGGGATTGTGTGATGTTCTCACGGGGAAAGGGCACGCTGAAGCAGCAATTAGCCAACATCAGACCTGTCTTAGAGGAGTTGAGGTCAAAGAAGGATGAGAGAGTCAAGGAATTTTTAAAAATAAAGTCCCAAATTTCTCAGATATGTGCTGAAATAGCAGGCTGTGGGCAATCCAAAGGTGTCACGGATCAAGATGTTGGTCAATGTGATCTGACAGCGAAGAAATTGGGGGAACTCAAATCGCACCTCGATGAACTTCAAAATGAAAAGATGTTGCGCCAGCAGAAAGTGAAGACTCATATCAGTACTATCAGCGAGCTTTCTGAAGTAATGTCAATTGATTTTTCGAAGACATTAAATGACATCCACCCAAGCTTGATTGATTCCTCAAATGGTGCATCACTAAGCATTAGCAACGACACTCTTGCTAGCTTAACTGGGGCAATTCATTCATTAAAGCAGGAAAAGCAACAAAGGCTACAAAAGATACAAGAACTTGCTAAATTCTTGGTAGAGTTATGGGATCTTATGGAGATGCCAATTGATGAGCAAAAGGCCTTTAGCCATGTTACTAGATTAATTTCAGCATCAGTTGATGAAGTGTCAATCCGAGGGTGCCTTTCTGCTGATGTTATCAAGCAGGCTGAGGTTGAAGTTGAGCGCTTAAATGTTATGAAAGCCAGTAAGATGAAGGAAATAGTGTTTAAAAGACAGAATGAACTTGAAGAAATTTACAGAGGGGTTCACATGGATGTGGATAGTGAATCTGCTAGACAGATTCTGACCAACCTCATAGAATCTGGTAATATTGACATGTCTGAATTGCTTCAAAACATGGATGATCAAATCAGAAAGGCCAAAGAGCAAGCTCTAAGCAGAAGAGATATCTTAGATAGGGTGGAGAAATGGAAATTTGCAGCTGAGGAGGAAAAGTGGTTAGATGAATATGAAAGGGATGAAAATCGATATAGTGCAGTAAGAGGAGCACACAAAAATTTGAAGCGTGCAGAGAAAGCACGCATTCTTGTCAGCAAGATTCAATCTATGGTAGACAATTTGACTGCAAAAGTGAAAGCATGGGAGGTGGAAAAAGGAATACCTTTCTTATATGAAAAGGTTCCATTGTTGGATAGCTTGGATGAATACAATGTACAACGGCAATTGAAAGAAGAAGAGAAGCGAAAATCTCGGGAGCAGAAGCGGCTTAATGAACAACTTGCTGTAGAGCAAGAAGCAATGTTTGGTTCAAGATCTGCAACAAAGAAGCCTCTGAGCCAGAGCACTCATGGTAACACCATAGTTGGGACACCGACTGGGCGCCGGATGCACACTCCTTCAGGCCGTTATGGAACCTCAGGTGCAAAGGATCGCAGAGAAAGTGGCAGAGGGAACATAATTCCAGTGAACTACGTTGCTCTTCCGAAAGATGATTCTGTTTCAAGGGGCAATTAA 1701 0.4215 MASTPPSISPSRTTCASLLRQLQMIWDEIGESDTDRDNMLLQLEQECLDIYHKKVEQTRKHKADLFKWLADAESEVTNIASSLGDCVMFSRGKGTLKQQLANIRPVLEELRSKKDERVKEFLKIKSQISQICAEIAGCGQSKGVTDQDVGQCDLTAKKLGELKSHLDELQNEKMLRQQKVKTHISTISELSEVMSIDFSKTLNDIHPSLIDSSNGASLSISNDTLASLTGAIHSLKQEKQQRLQKIQELAKFLVELWDLMEMPIDEQKAFSHVTRLISASVDEVSIRGCLSADVIKQAEVEVERLNVMKASKMKEIVFKRQNELEEIYRGVHMDVDSESARQILTNLIESGNIDMSELLQNMDDQIRKAKEQALSRRDILDRVEKWKFAAEEEKWLDEYERDENRYSAVRGAHKNLKRAEKARILVSKIQSMVDNLTAKVKAWEVEKGIPFLYEKVPLLDSLDEYNVQRQLKEEEKRKSREQKRLNEQLAVEQEAMFGSRSATKKPLSQSTHGNTIVGTPTGRRMHTPSGRYGTSGAKDRRESGRGNIIPVNYVALPKDDSVSRGN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01529 566 MobiDBLite consensus disorder prediction 502 522 - -
Trre15g01529 566 Coils Coil 152 179 - -
Trre15g01529 566 Coils Coil 236 256 - -
Trre15g01529 566 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 561 IPR007145 GO:0000226|GO:0008017
Trre15g01529 566 MobiDBLite consensus disorder prediction 496 550 - -
Trre15g01529 566 Coils Coil 295 315 - -
Trre15g01529 566 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 507 - -
Trre15g01529 566 Coils Coil 352 372 - -
Trre15g01529 566 Coils Coil 462 492 - -
Trre15g01529 566 Gene3D - 366 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01529 Trre-Chr15 12145482 12152093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01529 13 533 EF-hand Containing Proteins AT5G62250 36.029 5.78e-94 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01529 15 12145482 12152093 Trre15g01529 15 12145482 12152093 ECH