Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01523 ATGGGTGAAGCAAAAGATCTTGTCAACAACAAAGAAAATGGTGTTACACAAATTCCTTTAGATAATAAAATTAGTGGTGTAGAAAATGATGTAAGTGATAAAAAAAATTATTTAGATTGTCTTCAGGATGAAGCAAAAGTGATATTGAAATCAATAGCAAGTAAATGGAAGAATGTATTAGATGCAAATGCATTGGAAGTTATTCCTCTTAAAGGGGCAATGACCAATGAGGTATTCCAAATAAAATGGCAAACGATAGACGGGGAAATGTCAAGAAAGGTTCTTGTTAGAATCTATGGCGAAGGTACTAACATTTTCTTTGATAGGGCTAATGAGATTCGAACATTCGAATTCATCTCAAAGAATGGACAGGGACCTCGTTTGTTAGGAAGGTTTGCTCAGGGTCGTGTTGAAGAGTTCATCCGTGCAAGGACATTATCAGCACCTGATATGCGCGATCCAACTATTTCTGCTCTTATAGCCTCCAAAATGAAAGAATTCCATGATCTTGACATGCCTGGTTCCAAGAATGTGTACCTTTGGGATAGATTGCGAAATTGGCTTAGTGAAGCGAGGCGCTTGTCATCTCCCGAAGAAGTTGAGACATTTCATTTGGACATAATGGACAAAGAAATCTCTCTTCTAGAAAAGGAATTGTCGGTATCTCCTAAACGCATTGGGTTTTGCCACAACGATTTACAATACGGTAACATCATGCTCGATGAAGTTACCAATTCTGTGACAATAATTGATTATGAGTATGCAAGTTATAATCCCGTGGCATATGATATAGCAAACCACTTCACCGAGATGGCAGCCAACTATCATACCGAAACTCCGCATGTTCTTGACTTCAGCAAATATCCAGATTTGAAGGAACGTCAAAGATTTGTGAAGACATATTTGAGTTCAACAGGAGAACAAGTTAGTGATAGTGAAGTTCAACAACTACTTGATGAAGTTGAAAAGTATACACTTGCAAGTCATCTATTATGGGGCCTTTGGGGCATTGTTTCAGGGCATGTAAACAAAATTGATTTTGACTACAAGGAGTATGCAAAACAAAGGTTTCAAGAGTACTGGTCAAGGAAAAGTCAACTTTTGAGCCCTCATGGATCTTCCAATGATAATGTTATTTCTGGTAATGGGCCGAAACCATTGGCATCAATCGCTAAGAAAAAATCAACAAAGAGCCCACGAATCTCCAAGAAGTTGAAGAAATTTTTTAGTCTTGGTTTATTCAGATCAAAACACTAG 1257 0.3771 MGEAKDLVNNKENGVTQIPLDNKISGVENDVSDKKNYLDCLQDEAKVILKSIASKWKNVLDANALEVIPLKGAMTNEVFQIKWQTIDGEMSRKVLVRIYGEGTNIFFDRANEIRTFEFISKNGQGPRLLGRFAQGRVEEFIRARTLSAPDMRDPTISALIASKMKEFHDLDMPGSKNVYLWDRLRNWLSEARRLSSPEEVETFHLDIMDKEISLLEKELSVSPKRIGFCHNDLQYGNIMLDEVTNSVTIIDYEYASYNPVAYDIANHFTEMAANYHTETPHVLDFSKYPDLKERQRFVKTYLSSTGEQVSDSEVQQLLDEVEKYTLASHLLWGLWGIVSGHVNKIDFDYKEYAKQRFQEYWSRKSQLLSPHGSSNDNVISGNGPKPLASIAKKKSTKSPRISKKLKKFFSLGLFRSKH 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01523 418 PANTHER CHOLINE/ETHANOALAMINE KINASE 40 369 - -
Trre15g01523 418 SUPERFAMILY Protein kinase-like (PK-like) 35 367 IPR011009 -
Trre15g01523 418 Pfam Choline/ethanolamine kinase 92 292 - -
Trre15g01523 418 MobiDBLite consensus disorder prediction 368 398 - -
Trre15g01523 418 MobiDBLite consensus disorder prediction 368 382 - -
Trre15g01523 418 Gene3D - 100 361 - -
Trre15g01523 418 Gene3D Phosphorylase Kinase; domain 1 53 140 - -
Trre15g01523 418 CDD ETNK_euk 65 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01523 Trre-Chr15 12068966 12072270 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01523 24 369 Acyl Lipid Metabolism Gene Families AT1G74320 65.029 7.42e-175 490
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01523 15 12068966 12072270 Trre15g01523 15 12068966 12072270 ECH
Trre5g00270 5 1648312 1652233 Trre15g01523 15 12068966 12072270 PCT