Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01506 ATGGCTACTCAGACAATAGCTGAAACTGCACAGAAAATTGTCACCCCTGAAACCCTCCGCTATGCAGCAAAACAATCTCAACGTTGTCTCACTGTCCCTCTCCGTCTTCGCCGTGCCATTAAGAAATACCTTCGAGAGCAGGAGGAGCCATATATGAAGAGGAAGGTGTTGAGATTGTCACAGTCGTTCAATGAAATCAAGAATGTTAATCTGCAGCTGGCAACCACCACATCGAGGGAGATAGTTGAAGACCCTTTAAAGTCTTCTGAACAATCAAAACGTTGGAAGATTACGAGCTCCTATGGTGACATTGGTCTCACGTATAGAGATGATGAAACAATTGCTTATGTGGCTTCTCGAATGCCTGCCGTTTACTCTGCTTGTTACAGAGTACTTAAAGAGGTTCGTAGAAGGCTTCCTGGTTTCTCCCCAACCAAGGTCTTAGATTTTGGTGCTGGAACTGGTTCAGCTTTCTGGGCACTGCGGGAAGTTTGGCCAAAATCTTTGGAGAAAGTTAATTTAATAGAACCATCACAGTCAATGCAGCGTGCAGGTCAGAGTCTCATACAAGGTCTCAAGGATTTGCCACTTATTCATAGCTATGATAGCATTCAAGCTCTGTCGAAAAGTACTGGTAAATCGGGGAGAGGGCATGACCTTGTAGTTGCTTCTTATGTGCTGGGAGAGATCCCGTCGCTAAAGGATAGAATTACCACAGTTCGTCAGCTTTGGGATCTAACACAAGATGTTCTGGTTTTGGTTGAACCTGGAACGCCTCATGGATCAAGTATTATAGCTCAGATGAGATCTCACATATTATGGATGGAAAAGAGAAAACATCGTAAATCTTCTGAAAAGAACAATGAAGTTTGTAAAGATTTGATTACTGAGAAGGCCGGTGCTTTTGTGGTTGCTCCTTGTCCTCATGATGGTACTTGTCCTCTGGTAAAATCTGGAAAATATTGTCATTTTGTTCAGCGTTTGGAAAGGACATCGTCGCAGCGTGCTTACAAGCGTTCGAAGGATGTGCCCTTGCGTGGTTTTGAAGATGAGAAATTCTCCTATGTTGTTTTTAGAAAAGGACAAAGACCAAGTGAACCTTGGCCCCTTGATGGTATTACATTTGACACTCTGAAGGAGCAGCATGCGAAAAGAAATCCAGAGGAGCTTGAAATTGACTACGAGGACTGGTTGAAGTTGCAACAAGCTGACGATGATGCACCTCGTGAAAAAAATGTAGTAAAATATGATTCTGAAACCGATAACGGCGGTGAAGATGATAATGAAGAGAATGAGGAAATTGAAGAAACAGAGAGTGCTGATCTTGGAGGTGGCTGGGGAAGAATTGTGTACATGCCTCGTAGAAGGGGTAGACAAGTAATATTGAATGTGTGTAAATCAACCAAAAGTGATGCCTCAGAGGGTTCATTTGACCTTGTGGTTGTAACAAAGAGCAAGAATCCTATCTTGCATCATCAAGCCAAGAGATCTATTTGGGGTGATTTGTGGCCATTTTGA 1518 0.4295 MATQTIAETAQKIVTPETLRYAAKQSQRCLTVPLRLRRAIKKYLREQEEPYMKRKVLRLSQSFNEIKNVNLQLATTTSREIVEDPLKSSEQSKRWKITSSYGDIGLTYRDDETIAYVASRMPAVYSACYRVLKEVRRRLPGFSPTKVLDFGAGTGSAFWALREVWPKSLEKVNLIEPSQSMQRAGQSLIQGLKDLPLIHSYDSIQALSKSTGKSGRGHDLVVASYVLGEIPSLKDRITTVRQLWDLTQDVLVLVEPGTPHGSSIIAQMRSHILWMEKRKHRKSSEKNNEVCKDLITEKAGAFVVAPCPHDGTCPLVKSGKYCHFVQRLERTSSQRAYKRSKDVPLRGFEDEKFSYVVFRKGQRPSEPWPLDGITFDTLKEQHAKRNPEELEIDYEDWLKLQQADDDAPREKNVVKYDSETDNGGEDDNEENEEIEETESADLGGGWGRIVYMPRRRGRQVILNVCKSTKSDASEGSFDLVVVTKSKNPILHHQAKRSIWGDLWPF 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01506 505 MobiDBLite consensus disorder prediction 416 439 - -
Trre15g01506 505 Pfam Mitochondrial small ribosomal subunit Rsm22 286 504 IPR015324 GO:0006412|GO:0008168
Trre15g01506 505 Pfam Mitochondrial small ribosomal subunit Rsm22 112 278 IPR015324 GO:0006412|GO:0008168
Trre15g01506 505 Gene3D Vaccinia Virus protein VP39 115 294 IPR029063 -
Trre15g01506 505 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 296 IPR029063 -
Trre15g01506 505 PANTHER 37S RIBOSOMAL PROTEIN S22 23 505 - -
Trre15g01506 505 MobiDBLite consensus disorder prediction 422 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01506 Trre-Chr15 11845023 11851856 Dispersed/Wgd