Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01491 ATGGGTTCTTCAGTAGGAGGCAATGGTGTGGAGTGGCACGTGCGTCCTCCAAACCCTAAAAACCCAATCGTCTTCTTCGATGTCACCATCGGTAACATTCCCGCCGGTAGAATCAAAATGGAACTCTTCGCTGATATTGCCCCCAAAACCGCTGAGAATTTCAGGCAATTCTGCACGGGGGAGTACAGGAAAGCAGGACTTCCTATTGGTTACAAGGGTTGTCAATTTCATAGAGTGATTAAGGATTTTATGATTCAGGCTGGTGATTATGTAAAGGGTGATGGTAGTGGATGTGCTTCAATCTACGGACTTAAGTTTGACGATGAGAATTTCACTGCCAAACACACTGGACCTGGTCTTCTATCAATGGCAAATAGCGGACCAAATACCAATGGCTGTCAGTTCTTTATAACCTGTGCAAAATGCGACTGGCTGGACAACAAGCATGTCGTTTTTGGGAGAGTACTTGGAGATGGTCTTTTGGTCGTGAGGAAGATTGAGAATGTTGCAACTGGACCCAATAACCGGCCAAAATTAGCTTGTGTCATTGCTGAATGTGGTGAAATGTAA 570 0.4491 MGSSVGGNGVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPIGYKGCQFHRVIKDFMIQAGDYVKGDGSGCASIYGLKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01491 189 CDD cyclophilin_ABH_like 22 187 - -
Trre15g01491 189 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 71 88 IPR020892 GO:0003755|GO:0006457
Trre15g01491 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 IPR002130 GO:0000413|GO:0003755
Trre15g01491 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 162 IPR002130 GO:0000413|GO:0003755
Trre15g01491 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 IPR002130 GO:0000413|GO:0003755
Trre15g01491 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Trre15g01491 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 146 IPR002130 GO:0000413|GO:0003755
Trre15g01491 189 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 24 189 - -
Trre15g01491 189 FunFam Peptidyl-prolyl cis-trans isomerase 11 189 - -
Trre15g01491 189 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 26 187 IPR002130 GO:0000413|GO:0003755
Trre15g01491 189 Gene3D - 11 189 IPR029000 -
Trre15g01491 189 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 25 188 IPR002130 GO:0000413|GO:0003755
Trre15g01491 189 SUPERFAMILY Cyclophilin-like 12 189 IPR029000 -
Trre15g01491 189 PIRSF Peptidylpro_ismrse 12 189 IPR024936 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01491 Trre-Chr15 11710058 11714702 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01491 15 11710058 11714702 Trre15g01491 15 11710058 11714702 ECH