Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01483 ATGTCTGATTTGGTTGCTCGTACGGGTCGGCATCAGCAACGGTACGAGAATGGTTATCGTCTTGTTGCTGGGTGTGTTCCCTTTAGGTATAAAAGTTCTGGAGACGACGACTCTAGTTCGGAGAAGATTATTGAAGTGCTTATGATTAACTCACCTAGTGGACCAGGTCTTTTGTTTCCAAAGGGAGGTTGGGAGAATGATGAAACTGTTGAGGAGGCGGCTGTAAGAGAAGCTATAGAAGAAGCTGGAGTTCGAGGAGACCTAATGGATTGTCTTGGGTGCTATGAGTTTAGGAGTAAGACCCACCAAGATGAGTTCAGTCCAGAAGGGTGGTGTAAAGCAGCAATGTTTGCTTTGTTTGTCAAGGAGGAACTTGAACTGTGGCCTGAGCAAAATACCAGAAATCGGAGTTGGCTGGCTGTATCAGAGGCACTCGGAAGCCTCCGCCATGTGTGGATGAGGGATGCTCTGGAACGCTTCTGCAAATGGCACGAGGAAAAGTTTGTTGATGGAACAATATGA 522 0.4693 MSDLVARTGRHQQRYENGYRLVAGCVPFRYKSSGDDDSSSEKIIEVLMINSPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGDLMDCLGCYEFRSKTHQDEFSPEGWCKAAMFALFVKEELELWPEQNTRNRSWLAVSEALGSLRHVWMRDALERFCKWHEEKFVDGTI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01483 173 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 162 - -
Trre15g01483 173 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 163 - -
Trre15g01483 173 CDD Nudix_Hydrolase_9 21 154 IPR047198 GO:0016462
Trre15g01483 173 FunFam Nudix hydrolase 16, mitochondrial 5 160 - -
Trre15g01483 173 Pfam NUDIX domain 46 159 IPR000086 -
Trre15g01483 173 ProSiteProfiles Nudix hydrolase domain profile. 18 161 IPR000086 -
Trre15g01483 173 ProSitePatterns Nudix box signature. 62 83 IPR020084 GO:0016787
Trre15g01483 173 SUPERFAMILY Nudix 10 164 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01483 Trre-Chr15 11660256 11664082 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01483 15 11660256 11664082 Trre15g01483 15 11660256 11664082 ECH