Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01482 ATGGAAAACAATCGCCGTGCCGTCCGAACCTTAGTTTCAAAACTCAGCTCCGTTTCCGAACGAACACGAATCGAAGCACTTTGCGAGCTTCGGTTAATGTCAAAACAAGATCCACAAACCCGACCCATAATAACCGAATCGGGCGCAATCCCTTATCTAGCAGAAACTCTCTATTCATCTTCTCACCCTTCCCAAGAAAACGCCACCGCAACACTTCTCAATCTTTCGATAACAGAAAAAGAATCTATCATGTCCACGCGCGGTGTTCTCGACGCGCTTTCACATATAATTTCTCATCATTCTTCAACTTCCGCTGCCGCCGCCGTTCAATCAGCTTCCGCCACGATTCACAGCCTTCTTTCCTCGGTAGATGATTATCGAACCGTTGTTGGATCTAAACGTGAAATCGTTTACGCGCTTGTTGATATTCTCCGATGTCATAGATCATCACCGCCGAGAACGGTGAAAGATGCTTTGAAAGCTCTTTTCGCGATCGCGCTTCATCCGTTAAACCGTGCTACTATGGTTCAATTCGGCGTTGTTCCGGCGCTTTTTTCTCTAATTGTTAACGACGGAAGAGTAGGTATAGTTGAAGATGCAACCGCCGTGATCGCGCAGGTTGCCGGTTGTGACGAAAGCGTTGAAGCTTTCCGGAAGGTTTCTGGTGTTGGAGTGCTTGCGGATCTGCTTGATCTTAATACTGGTTCTAGTATGAGGACGAGAGAAAATGCGGTGTCAGCTTTGCTTAATCTTGTCCGGTGCGGCGGAGATGCGGTGGCCGGAGATGTTAGAGACGCAGTTGCTTTCGGTGCTTTGGACGGAATTGCCGATGTTAGAGATAAAGGGAGCGTTAAGGGGCAGAGTAAAGCTATGGAGTTGATGAGGGTGATGCTTGGTGGTGGTGATAGGAATGTCGTTTTGAATAGTGGTTCGTCGTTTGGTTCTTCTGTGATGAATGATGATAGTGGTACGTCGTTTTGA 981 0.475 MENNRRAVRTLVSKLSSVSERTRIEALCELRLMSKQDPQTRPIITESGAIPYLAETLYSSSHPSQENATATLLNLSITEKESIMSTRGVLDALSHIISHHSSTSAAAAVQSASATIHSLLSSVDDYRTVVGSKREIVYALVDILRCHRSSPPRTVKDALKALFAIALHPLNRATMVQFGVVPALFSLIVNDGRVGIVEDATAVIAQVAGCDESVEAFRKVSGVGVLADLLDLNTGSSMRTRENAVSALLNLVRCGGDAVAGDVRDAVAFGALDGIADVRDKGSVKGQSKAMELMRVMLGGGDRNVVLNSGSSFGSSVMNDDSGTSF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01482 326 PANTHER U BOX DOMAIN-CONTAINING 7 297 - -
Trre15g01482 326 FunFam ARM repeat superfamily protein 2 302 - -
Trre15g01482 326 Gene3D - 1 283 IPR011989 -
Trre15g01482 326 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
Trre15g01482 326 SMART arm_5 210 253 IPR000225 GO:0005515
Trre15g01482 326 SMART arm_5 122 167 IPR000225 GO:0005515
Trre15g01482 326 SMART arm_5 37 77 IPR000225 GO:0005515
Trre15g01482 326 SMART arm_5 168 209 IPR000225 GO:0005515
Trre15g01482 326 SUPERFAMILY ARM repeat 6 297 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01482 Trre-Chr15 11650273 11651253 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01482 15 11650273 11651253 Trre15g01482 15 11650273 11651253 ECH