Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01468 ATGAACAAAGAGTTTAACAGCATTGTTAAGGTTTGGGAAGCAGCAGTTAGAAAATCAGCTGGACCAAAGAAAAGGGCAAACAGAATATTCTCAACACCAATGTCTGTTGCCCATGTTGATGATGATGTTTACCAGGTTGAGAAGATTCTCAACAATGGTGATTTTTATACAGGTCAATGGTTAAACAATTTTCCAAATGGTCAAGGAAAATATCTATGGACAGATGGTTGTATGTATGTTGGTGAATGGCAAAAAGGTAATATCACAGGTAAAGGTAGGTTTAGTTGGCCAAGTGGTGCTACCTATGAAGGTGATTTCAAGAATGGTTTTATGGATGGTAAAGGTACTTATATAGGTTCTAATGGTGATACTTATAAAGGTTTTTGGGTTATGGATATGAAAAATGGACAAGGTACACAAAGTTATCCTAATGGTGATTTTTATGATGGTGATTGGAAAAAAGGGTTGCAAAATGGACATGGTAGATATCAATGGAAAAATGGTAATCATTATATTGGTCAATGGAGGAATGGTTTGTTTAATGGTAATGGTACTTTGATGTGGCAAAATGGTAATAGATATGATGGTTGTTGGGAAGATGGTTTTCCTAAAGGAAATGGTACATTTAGATGGTGTGATGGTAGTTTTTATGTTGGTGTTTGGAGTAAAGATTCAAAGGAACAAAGTGGTACTTATTATCCTTCTTCTGGTTCTGATGATGATCCTTTAGAATGGGATCCTATGGATCTTTTTTCAGTTGATTTGATTGATTGTTATATCTGTGGTTATGAGAAAGTTTCAATTTTTCCTTCACAGAAAAATTTGAACATGTTTGGTTTAGAGGAAGATAATACTAATAATAATAAACACTTGTTATCTAAGAAAATTACTGAAAGGGTTAGTAATTATAGTTCTGAAGATGGTTCTTATAGTAGTTATGATGGATCAAGGAGTCCTATGATTGGTTCTGTTCCTAGAGTTCCACATATGAGATTAAAGCCTCCAAAGAGACAAGGAGAGACTATTTCCAAAGGCCATAAGAACTATGAGCTCATGCTTAATTTGCAGCTAGGTATCAGACATGCTGTTGGAAGACCTGCTCCAACTACATCTCTTGATTTGAAGTCTTCTGCATTTGATCCTAAAGAAAAAGTATGGACTAAATTTCCACCAGAAGGATCCAAGCACACACCGCCTCATCCGTCTTGCGAGTTTAGATGGAAAGACTATTGTCCAGTAGTGTTCCGGGCTTTAAGAAAACTGTTCAAAGTAGATCCAGCTGATTACATGATATCGTTATGTGGGAACGACGCCCTTCGTGAGCTGTCATCCCCTGGAAAAAGTGGAAGCTTTTTTTATTTGACCAACGATGACCGATACATGATAAAGACTATGAAGAAATCAGAAGTAAAAGTTTTCTTGAGAATGCTTCCTGGTTACTATAAACACGTTCGCGCATTCGAGAACACTCTAGTAACTAAGTTCTTTGGCCTACATTGTGTTAAGCTACCAGGAGCTTCACAGAAGAAGGTTCGATTTGTCATCATGGGAAATCTATTTTGTTCACAATACGCCATTCATAGGCGTTTTGACTTAAAAGGTTCAACGTTTGGTCGTACGACTGATAAACCTGAGGAGGAAATAGAGCCTACAACAACACTTAAGGACCTTGACCTAAATTATATATTCCGATTACGGAAGTCTTGGTTTCAAGAATTCTGCAGGCAAGTGGATAAGGACTGTGATTTTCTTGAACAAGAAAGAATTATGGATTACAGTATGTTGGTAGGTCTCCATTTTCGAGGTTTATCAGGTAGTAGTGAGGCCGGTACACCTGCTCGTGGTTCTGGCGCTCAAACTCCAACAGGTGCCTTTGATGATGGAGCTCCCCGTCTTTCTGGAGTCGATGTGGATCGTATTGTAGTAGATCCTAGCCGGTGGATTCAATTAGGTATAAACATGCCAGCACGAGCCGAGTTGACTACACGAAAAAGTTGTGACACTCCTCAGTTGGTTGGAGAACCAACAGGAGAGACATATGAAATTATAATCTTTTTCGGTATAATCGATATATTACAAGATTATGACATTAGTAAAAAGCTTGAACACGCTTACAAATCATTTCAATATGATGCAACCACGATCTCTGCCGTTGATCCAAGACTATACTCAAGACGGTTTCGCGATTTCATCTTCAGAGTTTTTCTAGAGGACCCTTCTTGA 2223 0.3801 MNKEFNSIVKVWEAAVRKSAGPKKRANRIFSTPMSVAHVDDDVYQVEKILNNGDFYTGQWLNNFPNGQGKYLWTDGCMYVGEWQKGNITGKGRFSWPSGATYEGDFKNGFMDGKGTYIGSNGDTYKGFWVMDMKNGQGTQSYPNGDFYDGDWKKGLQNGHGRYQWKNGNHYIGQWRNGLFNGNGTLMWQNGNRYDGCWEDGFPKGNGTFRWCDGSFYVGVWSKDSKEQSGTYYPSSGSDDDPLEWDPMDLFSVDLIDCYICGYEKVSIFPSQKNLNMFGLEEDNTNNNKHLLSKKITERVSNYSSEDGSYSSYDGSRSPMIGSVPRVPHMRLKPPKRQGETISKGHKNYELMLNLQLGIRHAVGRPAPTTSLDLKSSAFDPKEKVWTKFPPEGSKHTPPHPSCEFRWKDYCPVVFRALRKLFKVDPADYMISLCGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKSEVKVFLRMLPGYYKHVRAFENTLVTKFFGLHCVKLPGASQKKVRFVIMGNLFCSQYAIHRRFDLKGSTFGRTTDKPEEEIEPTTTLKDLDLNYIFRLRKSWFQEFCRQVDKDCDFLEQERIMDYSMLVGLHFRGLSGSSEAGTPARGSGAQTPTGAFDDGAPRLSGVDVDRIVVDPSRWIQLGINMPARAELTTRKSCDTPQLVGEPTGETYEIIIFFGIIDILQDYDISKKLEHAYKSFQYDATTISAVDPRLYSRRFRDFIFRVFLEDPS 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01468 740 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 50 155 - -
Trre15g01468 740 MobiDBLite consensus disorder prediction 607 630 - -
Trre15g01468 740 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 341 735 IPR002498 GO:0016307|GO:0046488
Trre15g01468 740 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 334 518 IPR027484 -
Trre15g01468 740 Gene3D - 519 735 - -
Trre15g01468 740 Gene3D - 150 237 - -
Trre15g01468 740 Gene3D - 58 133 - -
Trre15g01468 740 Pfam MORN repeat 56 78 IPR003409 -
Trre15g01468 740 Pfam MORN repeat 194 215 IPR003409 -
Trre15g01468 740 Pfam MORN repeat 79 100 IPR003409 -
Trre15g01468 740 Pfam MORN repeat 102 124 IPR003409 -
Trre15g01468 740 Pfam MORN repeat 125 146 IPR003409 -
Trre15g01468 740 Pfam MORN repeat 148 169 IPR003409 -
Trre15g01468 740 Pfam MORN repeat 171 193 IPR003409 -
Trre15g01468 740 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 65 735 IPR023610 -
Trre15g01468 740 FunFam Phosphatidylinositol 4-phosphate 5-kinase 334 518 - -
Trre15g01468 740 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 142 238 - -
Trre15g01468 740 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 434 733 IPR002498 GO:0016307|GO:0046488
Trre15g01468 740 CDD PIPKc_AtPIP5K_like 348 734 - -
Trre15g01468 740 SMART PIPK_2 375 736 IPR002498 GO:0016307|GO:0046488
Trre15g01468 740 PIRSF PIP5K_plant 293 739 IPR017163 GO:0005524|GO:0016308
Trre15g01468 740 PIRSF PIP5K_plant 2 325 IPR017163 GO:0005524|GO:0016308
Trre15g01468 740 SUPERFAMILY SAICAR synthase-like 344 735 - -
Trre15g01468 740 SMART morn 54 75 IPR003409 -
Trre15g01468 740 SMART morn 123 144 IPR003409 -
Trre15g01468 740 SMART morn 146 167 IPR003409 -
Trre15g01468 740 SMART morn 169 190 IPR003409 -
Trre15g01468 740 SMART morn 77 98 IPR003409 -
Trre15g01468 740 SMART morn 100 121 IPR003409 -
Trre15g01468 740 SMART morn 192 213 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01468 Trre-Chr15 11487544 11491482 Dispersed/Wgd