Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01431 ATGGCTTCATTGAAACTTCCAGAGATTGTTCCTTCTCCTAACCATGATTCTGAACGTCTTAGAAATGCTTTCCAAGGATTTGGAACAAATGAAAAGGAACTAATCTTGGTATTAGGACATAGAAATGCTCAACAAAGGCAGGAAATTAAAGAAACTTATCAGAAACTTTACAATGAATCACTCATCGATCGTCTCCAATCTGAACTTTCTGGTGATTTTAGAAATGCAATAGTTCTATGGACTTATGATCCACCAGAAAGGGATGCAAAATATGCAAGGGAAGCATTGAAGGCTAAAAGAAAAGGGATCAAACAACTGCAGATTCTGGTTGAAATAGCGTGTGCCTCGACTCCGAATCATTTGATGGCTGTGAGACAAGCTTACTGTTCTCTGTTTGATTGCTCCCTCGAGGAGGATATTATACCCTCGGTTTCTCAGCCACTCACAAAAATTTTGGTTAGCCTGGTAAGCTCTTACAGACATAATAAAGTGACTGTAAATTTGGACGTTGCAAAATCAGAAGCAGAAAAACTACATGAAGCCATCAACAACAAGCAATTAGATGATGATCACATTGTTTGGATACTTAGCACAAGGAATGTTTTCCAGCTCCGCGAAACTTTCGCATCCTACAAGCAACTCTATGGCAATACATTTGAAGAGGACATTAAAAATTGTGGTAAAGGTGATTTGGCATCTCTCTTAAATGTAGTAGTATGGTGCATAGAATGCCCTGAGAAACATTTTGCAAAGGTAGTAAGAGATTCTATTGTTGGGTTCGGAACTGACGAAGATTCTCTCAACAGAGCTATCGTAACTCGAGCTGAAATCGATCTGTTGAAAGTCAGATTTGAATATGCCAACATGTACAAATCAAGTCTTGATGATGATGTCATTGGAGATACCTCAGGAGACTACATGGAGTTTTTGCTGACTTTGCTAGGGAAAGGACCAAAAGGAGACTAA 966 0.3892 MASLKLPEIVPSPNHDSERLRNAFQGFGTNEKELILVLGHRNAQQRQEIKETYQKLYNESLIDRLQSELSGDFRNAIVLWTYDPPERDAKYAREALKAKRKGIKQLQILVEIACASTPNHLMAVRQAYCSLFDCSLEEDIIPSVSQPLTKILVSLVSSYRHNKVTVNLDVAKSEAEKLHEAINNKQLDDDHIVWILSTRNVFQLRETFASYKQLYGNTFEEDIKNCGKGDLASLLNVVVWCIECPEKHFAKVVRDSIVGFGTDEDSLNRAIVTRAEIDLLKVRFEYANMYKSSLDDDVIGDTSGDYMEFLLTLLGKGPKGD 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01431 321 FunFam Annexin 1 82 - -
Trre15g01431 321 ProSitePatterns Annexin repeat signature. 261 313 IPR018252 GO:0005509|GO:0005544
Trre15g01431 321 Pfam Annexin 174 235 IPR018502 GO:0005509|GO:0005544
Trre15g01431 321 Pfam Annexin 16 79 IPR018502 GO:0005509|GO:0005544
Trre15g01431 321 Pfam Annexin 249 313 IPR018502 GO:0005509|GO:0005544
Trre15g01431 321 FunFam Annexin 244 316 - -
Trre15g01431 321 FunFam Annexin 169 243 - -
Trre15g01431 321 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Trre15g01431 321 PRINTS Annexin family signature 257 277 IPR001464 GO:0005509|GO:0005544
Trre15g01431 321 PRINTS Annexin family signature 301 314 IPR001464 GO:0005509|GO:0005544
Trre15g01431 321 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Trre15g01431 321 PRINTS Plant annexin signature 164 184 IPR009118 -
Trre15g01431 321 PRINTS Plant annexin signature 122 136 IPR009118 -
Trre15g01431 321 PRINTS Plant annexin signature 229 247 IPR009118 -
Trre15g01431 321 ProSiteProfiles Annexin repeat profile. 244 315 IPR018502 GO:0005509|GO:0005544
Trre15g01431 321 ProSiteProfiles Annexin repeat profile. 169 240 IPR018502 GO:0005509|GO:0005544
Trre15g01431 321 Gene3D Annexin 245 316 IPR037104 GO:0005509|GO:0005544
Trre15g01431 321 Coils Coil 168 188 - -
Trre15g01431 321 Gene3D Annexin 168 243 IPR037104 GO:0005509|GO:0005544
Trre15g01431 321 Gene3D Annexin 83 156 IPR037104 GO:0005509|GO:0005544
Trre15g01431 321 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
Trre15g01431 321 PANTHER ANNEXIN 12 313 - -
Trre15g01431 321 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Trre15g01431 321 FunFam Annexin 83 156 - -
Trre15g01431 321 SUPERFAMILY Annexin 2 315 IPR037104 GO:0005509|GO:0005544
Trre15g01431 321 SMART annex3 107 155 IPR018502 GO:0005509|GO:0005544
Trre15g01431 321 SMART annex3 261 313 IPR018502 GO:0005509|GO:0005544
Trre15g01431 321 SMART annex3 188 238 IPR018502 GO:0005509|GO:0005544
Trre15g01431 321 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01431 Trre-Chr15 11184571 11187170 Dispersed/Wgd