Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g04844 ATGATGAGGGATAAATTAAGATTCCGAACATTATTGTTACTTCTGGCTTCCATTACAACTCTCTCTATTTTCACTCTCCTCATTCACCATAACAACAACTCTGTCTCTCTTTTGAGAACTCTCTTCTTCAAACAACAACTACAAACAACACTTCAATCTCAAGGACCAGGACAAGGCGGCAAAGATCCCAACATTATTGTTACTCACTCACCGGATAACAAAGATCAAAATGCTATTATCATGTCTGGGGGGAGCAAGAGGAACTTTCAATTACAACCACCTCAGACTACCACATCACAAACAGTGTCAGATACTATTATTATTGCTCCAAAAAATCATTCGCTTGAAGGCCAAAACAAGGATACATCTCTATCTTCTACTACCATTGTGAATGACCAATTCCTTGATGGACTTTTAGTTTCTACATTGGACCAACCATCCTGCTTGAGTAGATATCAATCTTACTTATACCGCAAACCTTCACCTTATAAACCTTCTGCATATTTGATATCCAAGCTACGAAACTATGAACGTCTTCATACAAGTTGTGGACCTCATACCAAATCCTACGCCAAAGTCATGACAAAGGGTACAAAACTTAGCAAAAAGGATGCAGGAACAGATTGCAAATACCTTGTTTGGACACCTTCCAATGGATTGGGGAACAGGATAATAACCTTGGCTGCGGCATTCCTTTATGCTATCCTCACAGACCGGGTTCTACTTGTCAAATTTGGGATTGACATGTTTGGTCTCTTTTGTGACCCGTTTCCTCATTCCTCCTGGTTATTGCCCAGGAACTTTCCATATTGGAAAGATTACAAACATGTTCAAACATATGAAAGCATGCTAATCAATAGCAAGAAAAACAGATCAAAGGAACTTTTGCAGCAATTTCTTTTTCTTAATCTACAGCACTCCCATGATGGTCATAACAACTTCTTTCATTGTGATCAAAGTCAAGGTCTTCTCCAGAAAGTTCCTGCTCTGATTTTGTCGTCGGATCAGTATTTTGCCCCTTCTCTTTTTATGATTCCATCATTTCAACAAGAACTAAGCAAAATGTTCCCTGACAAAGACACTGTTTTTCACCATTTGGGGCGTTACCTTTTTCAACCATCCAATGAGGCATGGGAACTAATTACCCAGTTCTATGGGGCGCATTTAGCCAAGGCAAATGAGAAAATTGGCTTGCAGATTAGAGTATATAACCCTCACCAAGTACCGCATACAACTATTATAAATGAAATTCTAGCCTGCACCCTTCAGCATAAGCTGTTGCCCGAATTGGACGCGCAGAAGGCAGCAACATCTCGTTTGAAGAAGCCGGCATCAAAAGCTGTTCTAGTGGCATCTCTATATTCCGAATATGGTGAGAAGCTGAGGACTATGTATAAGGCAAATACAACTGTGACCGGTGAGGTAATAAAAGTTTATCAGCCAAGTCACGAAGGGCGTCAAAAATCAAATAATGACACGCACAATATTAAAGCATGGACAGAAATATATCTACTGAGTTTGTGTGATGCACTGATTACAAGCCCCAAGTCTACTTTTGGGTATGTTGCCCATAGTCTTGGAGGTTTAAAGCCATGGATTCTAAAGAGGGCATATGGGGAAACCATCCCAGATCCACCTTGTCAAAGAGCAATGTCCATGGAACCTTGTTTCCATTATCCTCCCAAGTATGACTGTAGGGCCAACAGCACAGTTGATTTTACTTCCCTTTTTCATCACATGAAGCACTGTGAGGATGTAAAGAATGGATTGAGGTTGGTTAATGCTAATCGTCAGGGTTTCAATGGAATGGTCCCCCATTCCTAG 1824 0.4052 MMRDKLRFRTLLLLLASITTLSIFTLLIHHNNNSVSLLRTLFFKQQLQTTLQSQGPGQGGKDPNIIVTHSPDNKDQNAIIMSGGSKRNFQLQPPQTTTSQTVSDTIIIAPKNHSLEGQNKDTSLSSTTIVNDQFLDGLLVSTLDQPSCLSRYQSYLYRKPSPYKPSAYLISKLRNYERLHTSCGPHTKSYAKVMTKGTKLSKKDAGTDCKYLVWTPSNGLGNRIITLAAAFLYAILTDRVLLVKFGIDMFGLFCDPFPHSSWLLPRNFPYWKDYKHVQTYESMLINSKKNRSKELLQQFLFLNLQHSHDGHNNFFHCDQSQGLLQKVPALILSSDQYFAPSLFMIPSFQQELSKMFPDKDTVFHHLGRYLFQPSNEAWELITQFYGAHLAKANEKIGLQIRVYNPHQVPHTTIINEILACTLQHKLLPELDAQKAATSRLKKPASKAVLVASLYSEYGEKLRTMYKANTTVTGEVIKVYQPSHEGRQKSNNDTHNIKAWTEIYLLSLCDALITSPKSTFGYVAHSLGGLKPWILKRAYGETIPDPPCQRAMSMEPCFHYPPKYDCRANSTVDFTSLFHHMKHCEDVKNGLRLVNANRQGFNGMVPHS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g04844 607 Pfam Xyloglucan fucosyltransferase 130 566 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre12g04844 607 FunFam Galactoside 2-alpha-L-fucosyltransferase 207 258 - -
Trre12g04844 607 Gene3D - 379 534 - -
Trre12g04844 607 Gene3D - 207 260 - -
Trre12g04844 607 PANTHER FUCOSYLTRANSFERASE 2-RELATED 50 594 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g04844 Trre-Chr12 61878712 61881547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g04844 127 593 Xyloglucan Fucosyltransferase1 AT2G03220 51.907 4.34e-171 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g04844 K13681 - gmx:100799776 820.076