Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04947 ATGGTATGGTTGGAGTTGAGTTCAAATGGGATCAGAAGAGCTTCCTTGGTCATCTTTGTCATATCTTTCTCTATACTCCTCATATTAACACTCACCTCCAACTTTGGTCATTTTGAGTTGTTTTCAAAAGATAATAATATTGTAATAAATGGAATAGGTCAAAATTTGACAACACAATGTTTGCAATTGAGAGGAATAATAACACAAAACATCACAAATAATGAATTGGAAACCAAAAATTCTACAGAGTCAAATACAGGATCAACAAATAGTTCCTCTTCATCAACTAAAAATCATGCTGATAAATTCCTTGATGGACTTGTACCTTCTGGATTTGATAAAGGATCATGCTTAAGTAGATACCAATCCTACTTATACAGCAAAGTATCACCTTATAAACCTTCTCCGTATCTCATATCCAAACTTCGCAATTATGAAGATCTTCACAGAAGATGTGGACCTCATACTAGTGCTTACAAGAGAACCATGGTAAGTCTTAATAGTTTCAAATCCAATGTTACTACTAGTGGATCATGTAATTACATAGTATGGACACATGTTAATGGCTTAGGGAACAGAATGGTTAGCATGGCTGCGACATTCCTTTATGCAATCCTCACTAACCGCGTCCTACTAGTGAAGTTTCATGATGACATGGTTGGCTTATTTTGTGAACCATTCCTCAACTCATCATGGTTATTGCCTAATGGTAAAGAATTTCCTTTTAGTACTGACGACAATGGAGAAAAAGATTTTGAAACATATGAAAGCGTGATGAAAAGGGATAGGAAAAACAATTCAAAGGAATTATTATTACCGTTGGTTATGCATCTCAAGATAGAACACACAGATGATGAACATGAAATGTTTTTCTCTTGTGATCATAGCCAACATCTTCTACATAAAGTTCCAATCTTGATTTTAAGATCAGATCAATACTTTGTACCTTCTCTTTTTATGGGTCCATCCTTCGGTCAAGAGCTTAGAAAAATGTTCCCAAACAAAGAAACTGTTTTTCACCATTTGGGACGCTACCTATTTTTCCCTTCAAATGATGTATGGGGACCTATCAAAAGGTTCTACCAAGCATATTTGGCCAAGACAGATGAGAAGATTGGAATCCAAGTAAGAGTATTTAATCCCAATCTCACTTCACACCAAACAATCATGAATCAAGTTTTGACCTGCGCACAAAAAAATAAGATGCTACCCAATTTCGCCGCAGAAGATTCAAAAGACTCTCCATGGAAAAATCAAACTTCGAAGTCAGTTTTGGTAGCATCTTTATATCGAGAGTATGGTGAGAACCTTAGAACAATGTATTTGAATAGACCAAGTGTTACAGGGGAAATCATAGGGGTTTATCAGCCAAGTCATGAAGAGCATCAAAAGTTTGGTGATAACTTGCACAACAAGAAAGCATTGACAGAAATGTATCTTTTAAGTTTATGTGATGTTTTGGTAACTAGCTCTCTATCAACTTTTGGGTATGTGGCTCAGAGTATGGGAGGCATAAAGCCATGGGTTCTTTACAAAATACAAGGCAACAACCTCCCAGATTCGCCATGTGTGCAAGATGTCTCTATGGAGCCTTGTTATCATATACCTCCTAAACTTGATTGCATGGAGAAACCTATAGATGATGATGTTGGTAAAGCTTTTCCTTACATGAGGAGATGTATGGACTATGGATTGGGTGTAAAGTTGGTCAATGATGTTGGTAAAGCTTTTCCTTAA 1737 0.3633 MVWLELSSNGIRRASLVIFVISFSILLILTLTSNFGHFELFSKDNNIVINGIGQNLTTQCLQLRGIITQNITNNELETKNSTESNTGSTNSSSSSTKNHADKFLDGLVPSGFDKGSCLSRYQSYLYSKVSPYKPSPYLISKLRNYEDLHRRCGPHTSAYKRTMVSLNSFKSNVTTSGSCNYIVWTHVNGLGNRMVSMAATFLYAILTNRVLLVKFHDDMVGLFCEPFLNSSWLLPNGKEFPFSTDDNGEKDFETYESVMKRDRKNNSKELLLPLVMHLKIEHTDDEHEMFFSCDHSQHLLHKVPILILRSDQYFVPSLFMGPSFGQELRKMFPNKETVFHHLGRYLFFPSNDVWGPIKRFYQAYLAKTDEKIGIQVRVFNPNLTSHQTIMNQVLTCAQKNKMLPNFAAEDSKDSPWKNQTSKSVLVASLYREYGENLRTMYLNRPSVTGEIIGVYQPSHEEHQKFGDNLHNKKALTEMYLLSLCDVLVTSSLSTFGYVAQSMGGIKPWVLYKIQGNNLPDSPCVQDVSMEPCYHIPPKLDCMEKPIDDDVGKAFPYMRRCMDYGLGVKLVNDVGKAFP 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04947 578 Gene3D - 355 507 - -
Trre11g04947 578 FunFam Galactoside 2-alpha-L-fucosyltransferase 177 228 - -
Trre11g04947 578 Pfam Xyloglucan fucosyltransferase 88 541 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre11g04947 578 PANTHER FUCOSYLTRANSFERASE 2-RELATED 16 571 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre11g04947 578 MobiDBLite consensus disorder prediction 77 97 - -
Trre11g04947 578 Gene3D - 177 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04947 Trre-Chr11 60191377 60193214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04947 96 570 Xyloglucan Fucosyltransferase1 AT2G03220 50.000 2.53e-161 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04947 K13681 - gmx:100809919 558.525