Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g04946 ATGGATAAATTAAGATTCCGAATATTATTGTTACTTCTGGCTTCCATTATAACTCTCTCTATTTTCACTCTCCTCATTCACCATAACAACAACAACTCTATCTCTCTTTTGACAACTCTCTTCTTCAAACAACAACTTCAATTTGAAGAACGAGGCAAAGATCCCAACATTATTGTTACTCACTCACCGGATAACAAAGATCAAAATGCTATTATCATGTCTGGGGGGAGCAAGAGGAACTTTCAATTACAACCACCTCAGACGACTAACACATCACAAACAGTGTCAGATATTATTATTATTGCTTCAAAAAATCATTCCCTTCAAGACCAAAACAAGGATACATCTCTATCTTCTTCTACTACCATTGCCAATGACCAATTCCTTGATGGACTTTTAGTTTCTACATTTCACCAACCATCCTGCTTGAGTAGATATCAATCTTACTTATACCGCAAACCTTCACCTTATAAACCTTCTGCATATTTGATATCCAAGCTACGAAACTATGAACGTCTTCATACATATTGTGGACCTCATACCAAATCATACGCCAAAGTCATGACAAAGGGTACAAAATTTACCAAAAAGGATGCAGCTACAGATTGCAAATACCTTGTTTGGATTCCTTCCAATGGATTGGGGAACAGGATAATAACCTTGGCTGCGGCATTCCTTTATGCTATCCTCACAGACCGGGTTCTACTTGTCAAATTTGGGATTGACATGTTTGGTCTCTTTTGTGACCCATTTCCTCATTCCTCCTGGTTATTGCCCAGGAACTTTCCATATTGGAAAGATTACAAACATGTTCAAACATATGAAAGCATGCTAATCAATAGCAAGAAAAACAGATCAAAGGAACTTTTGCCGCAATTTCTTTTTCTTAATCTACAGCACTCCCATGATGGTCATAACAACTTCTTTCATTGTGATCAAAGTCAAGGTCTTCTCCAGAAAGTTCCTGCTCTGATTTTGTCGTCGGATCAGTATTTTGCCCCTTCTCTTTTTATGATTCCATCATTTCAACAAGAACTGAGCAAAATGTTCCCTGACAAAGACACTGTTTTTCACCATTTGGGGCGTTACCTTTTTCAACCATCCAATGAGGCATGGGAACTAATTACCCAGTTCTATGGGGCGCACTTAGCCAAGGCAAATGAGAAAATTGGCTTGCAGATTAGAGTATATAACCCTCACCAAGTACCGCATACAACTATTATAAATGAAATTCTAGCCTGCACCCTTCAGCATAAGCTGTTGCCCGAATTGGACGCGCAGAAGGCAGCAACATCTCGTTTGAAGAAGCAGGCATCAAAAGCTGTTCTAGTGGCATCTCTATATTCCGAATATGGTGAGAAGCTGAGGACTATGTATAAGGCAAATACAACTGTGACCGGTGAGGTAATAAAAGTTTATCAGCCAAGTCACGAAGGGCGTCAAAAATCAAATAATGACACGCACAATATTAAAGCATGGACAGAAATATATCTACTGAGTTTGTGTGATGCACTGATTACAAGCCCCAAGTCTACTTTTGGGTATGTTGCCCATAGTCTTGGAGGTTTAAAGCCATGGATTCTAAAGAGGGCATATGGGGAAACCATCCCAGATCCACCTTGTCAAAGAGCAATGTCCATGGAACCTTGTTTCCATTATCCTCCCAAGTATGACTGTAGGGCCAACAGCACAGTTGATTTTACTTCCCTTTTTCATCACATGAAGCATTGTGAGGATGTAAAGAATGGATTGAGGTTGGTTAATGCTAATCGTCAGGGTTTCAATGGAATGGTCCCCCATTCCTAG 1806 0.397 MDKLRFRILLLLLASIITLSIFTLLIHHNNNNSISLLTTLFFKQQLQFEERGKDPNIIVTHSPDNKDQNAIIMSGGSKRNFQLQPPQTTNTSQTVSDIIIIASKNHSLQDQNKDTSLSSSTTIANDQFLDGLLVSTFHQPSCLSRYQSYLYRKPSPYKPSAYLISKLRNYERLHTYCGPHTKSYAKVMTKGTKFTKKDAATDCKYLVWIPSNGLGNRIITLAAAFLYAILTDRVLLVKFGIDMFGLFCDPFPHSSWLLPRNFPYWKDYKHVQTYESMLINSKKNRSKELLPQFLFLNLQHSHDGHNNFFHCDQSQGLLQKVPALILSSDQYFAPSLFMIPSFQQELSKMFPDKDTVFHHLGRYLFQPSNEAWELITQFYGAHLAKANEKIGLQIRVYNPHQVPHTTIINEILACTLQHKLLPELDAQKAATSRLKKQASKAVLVASLYSEYGEKLRTMYKANTTVTGEVIKVYQPSHEGRQKSNNDTHNIKAWTEIYLLSLCDALITSPKSTFGYVAHSLGGLKPWILKRAYGETIPDPPCQRAMSMEPCFHYPPKYDCRANSTVDFTSLFHHMKHCEDVKNGLRLVNANRQGFNGMVPHS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g04946 601 Gene3D - 200 274 - -
Trre11g04946 601 FunFam Galactoside 2-alpha-L-fucosyltransferase 201 252 - -
Trre11g04946 601 Pfam Xyloglucan fucosyltransferase 117 560 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre11g04946 601 Gene3D - 373 528 - -
Trre11g04946 601 PANTHER FUCOSYLTRANSFERASE 2-RELATED 41 588 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g04946 Trre-Chr11 60186775 60189075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g04946 121 587 Xyloglucan Fucosyltransferase1 AT2G03220 51.907 2.22e-170 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g04946 K13681 - gmx:100799776 818.15