Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g04527 ATGATGATGTTTGATGACATGGGGTTTTGTGGTGATTTGGATATGTTCTGTGGTACACTTGGGGAAGGGGATATTTCTGTGAGGCAAACCGAGCCAGATTCGGTAGTCGAGGATGATTATAGTGATGAAGAAATGGATGTGGATGAGCTTGAACGAAGGATGTGGAGGGACAAAATGCGTCTCAAGCGATTGAAAGAGCAAACCAAGGCTAAAGAAGGAATTGACGCCGCAAAGGCAAGACAGTCTCAGGAACAGGCAAGGAGGAAAAAGATGTCAAGAGCTCAAGATGGAATATTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCACAGGGATTTGTTTACGGGATAATTCCCGAGAAGGGAAAACCGGTGACTGGAGCATCTGACAATCTTCGTGAATGGTGGAAGGATAAGGTTCGGTTCGATAGGAATGGTCCGGCTGCCATATCCAAGTATCAAGCAGATAACGCGATTCCAGGGAAGAACGACGGATGCAATTCCATCGGTCCAACTCCTCACACCTTGCAAGAATTACAGGACACAACCTTAGGATCTCTCTTATCTGCACTTATGCAGCACTGTGATCCACCTCAGAGGCGTTTCCCATTAGAGAAGGGTAATCCTCCACCATGGTGGCCAACTGGAAACGAAGAGTGGTGGCCACAGATTGGTTTGCCTAAAGATCAAGGTCCTCCACCATACAAGAAACCCCATGATCTGAAAAAAGCATGGAAAGTCGGTGTTCTAACTGCCGTTATCAAGCATATGTCTCCTGATATAGCCAAGATTCGCAAGCTAGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACGGCCAAGGAAAGTGCAACCTGGCTTGCTATCATCAACCAAGAGGAGGCCTTGGCTCGAGAGCTTTATCCCGATTATTGCCCTCCGTTGTCCTCTAGCGGAGGTAGTGGTTCTATGGTCATCAACGATTGCAGCGAGTATGATGTTGATGGAGCTGAGGATGAGTCAAACTTTGACGTGGATGACCGAAAACCCGAGAATCTTCATCCATCCAATCTTGGGATGGACATAATGAGGGGAAGGTTTCCAGTTCAGCAACCTGCTCCTCCAATCAAGGGAGAGGTTGAGGTTATCACAAGCTTGGATTTCATTCGGAAGAGGAAGATCTCGAGCGAATTTAACATGATGATGGATCAGAAAATCTACACATGTGAACATCCTCAATGTCCTTATAGTGAAATTCGCCTCGCCTTTCAAGACAGGTCTTCTAGGGACAATCATCAATTGAACTGTCCATATAGAAACAGTTCCGCAGGTTATGGCGGCCCTAACTTTCACGTTACCGAGGTTAAGCCTGTTATTTTCCCACAAAGCTTTGTTCAACCCAATCCCTCAACTCAGTCTGCTACTTTGGTTCCACCTTCATTCGATTTAACCGGACTTGGAGTTTCGGAGGACGGCCAGAAAATGATCAGCGACCTAATGTCTGTCTATGATACCGATATTATAGCAAACAAGAATGCAAGTTCCACCAATTGTATATCTGTCGAACACCAAAACCTTTCTCAGCCGATCATTCAGCCACAACAACAGGAGAATTTCTTTACGAGTCAAGGAATGCCGATGGAAGCAAACTTTTTCACTCGTGAGGAAAGTCAATTTGACCGGTTCAGGGCCGTAAACACTCCATTCGAAACCAACCACAACCACAACAACGACAATAATATCAATCTCATGTTTGGTTCTTCATGTGATTTAACATCCTTTGATTTTAAGGAGGATCTACAACTACAAGGAGGAGGAGTAGGAATGGATACAGTTTACAAACAACCAGATGTTTCAATATGGTTTATAGATATTATAATGCTTGGCAAGTCTTGTTCTGGATATATGTTGTTATTTATGGTAAGAAGAATCGCTACACGGACATATGAACAAAAAATGACACAGACTCAAGTGTTAAAGAAGAAATGA 1971 0.4404 MMMFDDMGFCGDLDMFCGTLGEGDISVRQTEPDSVVEDDYSDEEMDVDELERRMWRDKMRLKRLKEQTKAKEGIDAAKARQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAISKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGNPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLSSSGGSGSMVINDCSEYDVDGAEDESNFDVDDRKPENLHPSNLGMDIMRGRFPVQQPAPPIKGEVEVITSLDFIRKRKISSEFNMMMDQKIYTCEHPQCPYSEIRLAFQDRSSRDNHQLNCPYRNSSAGYGGPNFHVTEVKPVIFPQSFVQPNPSTQSATLVPPSFDLTGLGVSEDGQKMISDLMSVYDTDIIANKNASSTNCISVEHQNLSQPIIQPQQQENFFTSQGMPMEANFFTREESQFDRFRAVNTPFETNHNHNNDNNINLMFGSSCDLTSFDFKEDLQLQGGGVGMDTVYKQPDVSIWFIDIIMLGKSCSGYMLLFMVRRIATRTYEQKMTQTQVLKKK 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g04527 656 MobiDBLite consensus disorder prediction 332 354 - -
Trre10g04527 656 FunFam Ethylene insensitive 3-like 1 80 158 - -
Trre10g04527 656 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 593 IPR006957 GO:0003700|GO:0005634
Trre10g04527 656 FunFam Ethylene insensitive 3-like 1 168 305 - -
Trre10g04527 656 Coils Coil 47 67 - -
Trre10g04527 656 Pfam Ethylene insensitive 3 48 295 IPR047091 GO:0003700
Trre10g04527 656 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Trre10g04527 656 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Trre10g04527 656 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Trre10g04527 656 MobiDBLite consensus disorder prediction 70 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g04527 Trre-Chr10 54211735 54216863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g04527 2 616 EIL Transcription Factor Family AT3G20770 60.863 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trre10g04527 EIN3 5.4e-130 No_clan