Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme923470g00001 GGTGTTCCTCCTCCATGGTGGCCAACAGGTGATGAAGACTGGTGGCCCCAAATCGGTTTACCAAAAGATCAAGGTTGTCCGCCTTACAAGAAACCTCATGACTTGAAGAAGGCGTGGAAGGTTGGAGTTTTGACTGCAGTTATCAAGCACATATCTCCTGACATAGCGAAAATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACGGCTAAGGAA 228 0.4693 GVPPPWWPTGDEDWWPQIGLPKDQGCPPYKKPHDLKKAWKVGVLTAVIKHISPDIAKIRKLVRQSKCLQDKMTAKE 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme923470g00001 76 Gene3D - 1 76 IPR023278 GO:0003700|GO:0005634
Trme923470g00001 76 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 76 IPR006957 GO:0003700|GO:0005634
Trme923470g00001 76 Coils Coil 58 76 - -
Trme923470g00001 76 Pfam Ethylene insensitive 3 1 76 IPR047091 GO:0003700
Trme923470g00001 76 SUPERFAMILY DNA-binding domain of EIN3-like 1 76 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme923470g00001 Trme-Chr923470 3 230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme923470g00001 1 76 EIL Transcription Factor Family AT3G20770 90.789 3.06e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trme923470g00001 EIN3 1.8e-37 No_clan