Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61470g00001 ATGGGCTCGTCCATCATTTCTATCCCTATTTGTTTTGATGGTGATGCATTTGATTCTGTTGAGTTGCTAAATGATAAACTGCTTGGCGGCCTTCTATCTGATGGATTCGATGAAAAATCTTGTCTAAGTAGGTATCAGTCAGTTATGTTCCACAAAGGACTATCGGGAAAACCTTCTTCTTACCTTATTTCTAAATTGAAAAAGTATGAAGCTCGACACAAACAATGTGGACCTTATACTGAATCCTATAACAAAACGGTGAAAGAACTCGGCTCTGGTCAATTTTCCGATTCCTCGGATTGTAAATATGTAGTATGGATTTCATTTAGTGGGTTGGGGAATAGGATATTGACCCTAGCTTCAGCATTTCTTTATGCTCTCCTCACAGACCGTGTTTTACTAGTTGACCCTGGAGTGGATATGACTGACCTCTTTTGTGAACCATTTCCGGATGCTTCCTG 461 0.3991 MGSSIISIPICFDGDAFDSVELLNDKLLGGLLSDGFDEKSCLSRYQSVMFHKGLSGKPSSYLISKLKKYEARHKQCGPYTESYNKTVKELGSGQFSDSSDCKYVVWISFSGLGNRILTLASAFLYALLTDRVLLVDPGVDMTDLFCEPFPDAS 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61470g00001 153 PANTHER FUCOSYLTRANSFERASE 2-RELATED 21 152 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trme61470g00001 153 FunFam Galactoside 2-alpha-L-fucosyltransferase 99 150 - -
Trme61470g00001 153 Pfam Xyloglucan fucosyltransferase 24 153 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trme61470g00001 153 Gene3D - 98 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61470g00001 Trme-Chr61470 129 691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61470g00001 12 149 Xyloglucan Fucosyltransferase1 AT2G03220 67.626 8.29e-57 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61470g00001 K13681 - pvu:PHAVU_003G188900g 226.868