Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6046g00001 ATGGTACATCTTAATAGTTTCAAATCCAATGTTACTACTACTGGATCATGTAAGTACATAGTATGGACACATGTTAATGGCTTAGGGAACAGAATGGTTAGCATGGCTGCAACATTCCTTTATGCAATCCTCACTGACCGCGTCCTACTAGTGAAATTTCAAGATGACATGGTTGGCTTATTTTGTGAACCGTTCCTCAACTCATCATGGTTATTGCCTAATGGTAAAGAATTTCCTTTTAGTACTGACGACAACGGAAAAAAAGATTTTGAAACATATGATAGTGTGATGAAAAGGGATAGGGAAAACAATTCAAAGGAATTATTATTACCATCGGTTATGCATCTCAAGATAGAACACACAGATGATGAACATGAAATGTTTTTCTCTTGTGATCATAGCCAACATCTTCTACATAAAGTTCCAATCTTGATTTTAAGATCAGATCAATACTTTGTACCTTCTCTTTTTATGGGTCCATCCTTCGGTCAAGAGCTTAGAAAAATGTTCCCAAACAAAGAAACTGTTTTTCACCATTTGGGACGCTACCTATTTTTCCCTTCAAATGATGTATGGGGACCAATCAAAAGGTTCTATCAAGCATATTTGGCCAAGGCAGATGAGAAGATTGGAATCCAAAGTTTGGGAGGCCTAAAGCCATGGGTTCTTTACAAAATACAAGACAACAACCTCCCAGATTCGCCATGTGTGCAAGATGTCTCTATGGAGCCTTGTTATCATATACCTCCTAAACTTGATTGCATGGAGAAACCTATAGATGATGATGTTG 790 0.3747 MVHLNSFKSNVTTTGSCKYIVWTHVNGLGNRMVSMAATFLYAILTDRVLLVKFQDDMVGLFCEPFLNSSWLLPNGKEFPFSTDDNGKKDFETYDSVMKRDRENNSKELLLPSVMHLKIEHTDDEHEMFFSCDHSQHLLHKVPILILRSDQYFVPSLFMGPSFGQELRKMFPNKETVFHHLGRYLFFPSNDVWGPIKRFYQAYLAKADEKIGIQSLGGLKPWVLYKIQDNNLPDSPCVQDVSMEPCYHIPPKLDCMEKPIDDDV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6046g00001 263 Gene3D - 14 68 - -
Trme6046g00001 263 PANTHER FUCOSYLTRANSFERASE 2-RELATED 212 257 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trme6046g00001 263 Pfam Xyloglucan fucosyltransferase 213 254 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trme6046g00001 263 Pfam Xyloglucan fucosyltransferase 11 213 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trme6046g00001 263 FunFam Galactoside 2-alpha-L-fucosyltransferase 15 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6046g00001 Trme-Chr6046 504 1668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6046g00001 213 261 Xyloglucan Fucosyltransferase1 AT2G03210 44.898 1.32e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6046g00001 K13681 - qsa:O6P43_033736 268.085