Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme60108g00001 | ATGGTAGTAAACGGTACTGTTGGAACTATCCCTGTGGTTGTCGGTCCTCCAAATATTCAAGATTTTGCTCCTTATCCTGGTTCAGTTTTACATATTAAAGAACTACAAGATGTCGAGTCTGTTGCCAAGACCATGAGATACCTAGCAGAAAACCCTGAAGCATATAATCAATCATTGAGGTGGAAGTATGAGGGGCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACAAAGAGTAGAGAGAAAGAAGAAAAGAGCCCAGACTTCAAGAAACGCCCTTGCAAATGCACTAGAGGGTCAAAAACTGTATATCATATCTAT | 363 | 0.4242 | MVVNGTVGTIPVVVGPPNIQDFAPYPGSVLHIKELQDVESVAKTMRYLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATKSREKEEKSPDFKKRPCKCTRGSKTVYHIY | 121 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme60108g00001 | 121 | PANTHER | ALPHA- 1,3 -FUCOSYLTRANSFERASE | 7 | 100 | IPR001503 | GO:0006486|GO:0008417|GO:0016020 | |
| Trme60108g00001 | 121 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 7 | 96 | - | - | |
| Trme60108g00001 | 121 | Gene3D | - | 6 | 71 | IPR038577 | - | |
| Trme60108g00001 | 121 | Pfam | Glycosyltransferase family 10 (fucosyltransferase) C-term | 8 | 96 | IPR001503 | GO:0006486|GO:0008417|GO:0016020 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme60108g00001 | Trme-Chr60108 | 15 | 758 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme60108g00001 | 8 | 121 | Xyloglucan Fucosyltransferase1 | AT3G19280 | 74.561 | 6.93e-63 | 197 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme60108g00001 | K00753 | - | gmx:100776065 | 218.009 |