Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20943g00001 ATGTTAATGAGTAGCAAGAAAAACAGAGCAAAGGAGCTTTTGCCACAATTTCTTATTCTTAATCTACAGCACTCCCATGATGGTCATAACAACTTCTTTCATTGCGATCAAAGTCAAGGTCTTCTCCAGAAAGTTCCTGTTCTAATTTTGTCGTCGGATCAATATTTTGTCCCTTCTCTTTTTATGATTCCATCATTTCAACAAGAACTAAGCAAAATGTTCCCCGAGAAAGACACTGTTTTTCACCATTTGGGACGTTACCTTTTTCAACCATCCAATCAGGCATGGGAACTAATTAGCAGGTTCTATGAGGCGCACTTAGCCAACGCAAATGAGAAAATTGGCTTGCAGATTAGAGTATATAACACTCACCAAGTACCGCATACAACTATTATAAATGAAATTCTAGCCTGCACCCTTCAGCATAAGCTGTTGCCCGAATTGGACGCGCAGAAGGCAGCAACATCTCGTTTGAAGAAGCAGACATCAAAAGCTGTTCTAGTGGCATCTCTATATTCCGAATATGGTGAGAAGCTGAGGACTATGTATAAGGCAAATACAACTGTGACCGGTGAGGTAATAAAAGTTTATCAGCCAAGTCACGAAGGGCGTCAAAAATCAAATAATGACACGCACAATATTAAAGCATGGACAGAAATATATCTACTGAGTTTGTGTGATGCATTGATTACAAGCCCCAAGTCTACTTTTGGGTATGTTGCCCATAGTCTTGGAGGTTTAAAGCCATGGATTCTAAAGAGGGCATATGGGGAAACCATCCCAAATCCACCTTGTCAACGAGCAATGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGACTGTAGGGCCAACAGCACAGTTGATTTTACTTCCCTTTTTCATCACATGAAGCATTGTGAGGATGTAAAAAGTGGATTGAGGTTGGTTAATGCTAATCGTAGGTCCTCAAGCACAGTGAAAGTGTTATTGACTAGTAGAAACGGTTTCATTGGAATGGTCCCCTATTCCCAGTTCAGTGAATTGATGGGAAACCTCGCATGA 1047 0.4088 MLMSSKKNRAKELLPQFLILNLQHSHDGHNNFFHCDQSQGLLQKVPVLILSSDQYFVPSLFMIPSFQQELSKMFPEKDTVFHHLGRYLFQPSNQAWELISRFYEAHLANANEKIGLQIRVYNTHQVPHTTIINEILACTLQHKLLPELDAQKAATSRLKKQTSKAVLVASLYSEYGEKLRTMYKANTTVTGEVIKVYQPSHEGRQKSNNDTHNIKAWTEIYLLSLCDALITSPKSTFGYVAHSLGGLKPWILKRAYGETIPNPPCQRAMSMEPCFHYPPKYDCRANSTVDFTSLFHHMKHCEDVKSGLRLVNANRRSSSTVKVLLTSRNGFIGMVPYSQFSELMGNLA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20943g00001 348 PANTHER FUCOSYLTRANSFERASE 2-RELATED 7 312 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trme20943g00001 348 Gene3D - 97 253 - -
Trme20943g00001 348 FunFam Galactoside 2-alpha-L-fucosyltransferase 97 251 - -
Trme20943g00001 348 Pfam Xyloglucan fucosyltransferase 10 284 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20943g00001 Trme-Chr20943 106 1235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20943g00001 18 311 Xyloglucan Fucosyltransferase1 AT2G03220 52.381 2.21e-111 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20943g00001 K13681 - gmx:100799776 554.673