Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19615g00001 AGACGTGTGGGAGAACCACTTCGTGCGTATATGGATCTCGAAGCTGGCCGAAGGAGATCTGGTCGAGAGGATATATACATTAGTTACCATGCTGAAGATGATGTACAGTCAACCTATGCCGGTGCTCTGTTTCATAACGGTCGAAACTATCATGTCTCCAATACTAAAAGCAGTGATATACTTGTTTATTGGTCTTCATCGCGGTGTCTCTCTCAAAGGAATGAACTTGCCAAGAAACTTCTTGGTTTGCTGCCACATCATTCTTTTGGCAAGTGCCTGAACAATGTCGGTGGTCTAGATATGGCTCTTTCGTTCTTTCCCGAGTGTGAAAAAGATGCAAATGCTAAACCAAAATGGTGGGATCATTTACATTGTGCCATGTCTCACTACAAGTTTGTTCTTGCAATCGAGAACACTTTCACCGAGAGTTACGTGACAGAGAAGTTATATTATGCATTGGACTCGGGTGCAGTGCCTATCTATTTTGGTGCACCAAACGTCATGGATTTTGTTCCTCCACATTCAATAATAGATGGTAGAAAATTCAAATCAGTGGAAGAACTGGCTTCATACGTGAAGGCCGTAGCTAATGACCCAGTAGCCTATGCAGAATACCATGCATGGAGAAGGTGCGGTGTAATGGGTAACTATGCAAAAACACGAGCCGTTAGCCTCGACACATTGCCATGCCGGTTATGTGAGGCTGTTAGCAAAAAAGGTGGAAGAAATGCAAGAAGCTAG 741 0.4372 RRVGEPLRAYMDLEAGRRRSGREDIYISYHAEDDVQSTYAGALFHNGRNYHVSNTKSSDILVYWSSSRCLSQRNELAKKLLGLLPHHSFGKCLNNVGGLDMALSFFPECEKDANAKPKWWDHLHCAMSHYKFVLAIENTFTESYVTEKLYYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFKSVEELASYVKAVANDPVAYAEYHAWRRCGVMGNYAKTRAVSLDTLPCRLCEAVSKKGGRNARS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19615g00001 246 Gene3D - 10 217 IPR038577 -
Trme19615g00001 246 FunFam Alpha-(1,4)-fucosyltransferase 8 214 - -
Trme19615g00001 246 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 238 - -
Trme19615g00001 246 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 18 238 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trme19615g00001 246 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 60 240 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19615g00001 1 244 Xyloglucan Fucosyltransferase1 AT1G71990 77.049 4.06e-147 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19615g00001 K14412 - gmx:100791990 475.322