Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14643g00001 GTGGACAAAGTGGAAACCCTGACGCACTACAAATTTAGCTTAGCGTTTGAAAATTCTAACGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCACTTGTTGCTGGAACTATCCCTGTGGTTGTCGGTCCTCCAAATATTCAAGATTTTGCTCCTTATCCTGGTTCAGTTTTACATATTAAAGAACTACAAGATGTCGAGTCTGTTGCCAAGACCATGAGATACCTAGCAGAAAACCCTGAAGCATATAATCAATCATTGAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACAAAGAGTAG 312 0.4038 VDKVETLTHYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGPPNIQDFAPYPGSVLHIKELQDVESVAKTMRYLAENPEAYNQSLSCTFILPPLHSLGHKE 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14643g00001 103 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 5 85 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trme14643g00001 103 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 5 87 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trme14643g00001 103 Gene3D - 1 92 IPR038577 -
Trme14643g00001 103 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14643g00001 Trme-Chr14643 311 1422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14643g00001 1 87 Xyloglucan Fucosyltransferase1 AT3G19280 74.713 9.45e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14643g00001 K00753 - gmx:100776065 162.54