Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme102672g00001 TTTGCTCCTTATCCTGGTTCAGTTTTACATATTAAAGAACTACAAGATGTCGAGTCTGTTGCCAAGACCATGAGATACCTAGCAGAAAACCCTGAAGCATATAATCAATCATTGAGGTGGAAGTATGAGGGGCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACAAAGAGTAGAGAGAAAGAAGAAAAGAGCCCAGACTTCAAGAAACGCCCTTGCAAATGCACTAGAGGGTCAAAAACTGTATATCATATCTATGTGAGAGAAAGGGGAACATTTGAGATGGAGTCCATTTACTTGAGGTACACTTCTTAA 357 0.4202 FAPYPGSVLHIKELQDVESVAKTMRYLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATKSREKEEKSPDFKKRPCKCTRGSKTVYHIYVRERGTFEMESIYLRYTS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme102672g00001 118 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 5 76 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trme102672g00001 118 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 75 - -
Trme102672g00001 118 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 1 79 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trme102672g00001 118 Gene3D - 1 51 IPR038577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme102672g00001 Trme-Chr102672 69 518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme102672g00001 1 115 Xyloglucan Fucosyltransferase1 AT3G19280 75.652 7.91e-64 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme102672g00001 K00753 - gmx:100776065 221.09