Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4676 ATGGTTTTCTCTTCTATTCCATCTTATTTAGATCCTCTCAATTGGCAGCAACAACCAAATCAACATCAGTTGCTTCCACCACTATCCTCACAGCCACATGGTGCTGGCTCAATAATCAGGCATGGTTCGTTACCGGATCAAGCTCAAGTTCAAGCTCAGGAAGTTCAAACAGGACAGGCTCAGGCTCAGGCTCAGCAAGGTAAGTTACCACCACCGTCAGAAACAGCTTTAAAGTGTCCTCGTTGTGAATCAACCAACACAAAATTTTGTTACTACAACAACTATAACTTGTCTCAACCAAGACACTTTTGCAAGACGTGTAGGCGTTATTGGACGAGAGGGGGTGCGTTAAGAAATGTTCCTGTTGGTGGAGGGTGTCGTAGAAGCAAAAAGACCAAAAAGAGTACTAGTACTACTACTACACCCTCCAAATCAAATGATAAAGAATATTCAACAAGTGCAATCCATTCAACTACTTCAAACCCTCATGGTGATCAATTTTTACATCCAACTAGCAGAAATTACTTGAACATGTCATCACTTCAGAATCTGAACCGGTTCGGTGTTGGAAACATGTTTCAAATGGGAGATTATAGCTCAAATACCGGTGGAGGAGAAGGCGGAGTTGTAGATCAGTGGCGATTTCAACAATTTCCTTTCATGAATAATGGTTTTGAGTCAAGTTCAAATGTTTCTTTCCCATTTCAAAGTGAAATTATTGAACCACAAACTTCGTCTAGGGTTACTACTCAGATACCTACATCGATTAAATCGGAATATAACGGAGGTTTGAATTTGCTAAGATCTCCTCTTAGCTTCTCACAAAATAACAACCATTACAACAATTCATCATGGACTGATATTTCTGGTCTCGCAACTTCTTCCACTAGTCGTCTCATGTAA 903 0.4031 MVFSSIPSYLDPLNWQQQPNQHQLLPPLSSQPHGAGSIIRHGSLPDQAQVQAQEVQTGQAQAQAQQGKLPPPSETALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRSKKTKKSTSTTTTPSKSNDKEYSTSAIHSTTSNPHGDQFLHPTSRNYLNMSSLQNLNRFGVGNMFQMGDYSSNTGGGEGGVVDQWRFQQFPFMNNGFESSSNVSFPFQSEIIEPQTSSRVTTQIPTSIKSEYNGGLNLLRSPLSFSQNNNHYNNSSWTDISGLATSSTSRLM* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4676 300 MobiDBLite consensus disorder prediction 122 165 - -
Tpr7g4676 300 MobiDBLite consensus disorder prediction 135 165 - -
Tpr7g4676 300 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 26 297 - -
Tpr7g4676 300 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
Tpr7g4676 300 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Tpr7g4676 300 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Tpr7g4676 300 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 297 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4676 Tpr-Chr7 55098467 55100281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4676 1 294 C2C2-Dof Transcription Factor Family AT2G37590 34.985 2.30e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Tpr7g4676 zf-Dof 9.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4676 - - cam:101511165 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4676 7 55098467 55100281 Tpr7g4676 7 55098467 55100281 ECH