Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g4348 ATGGATATAATGGATCCTTCTTGTGGACAAACTCAGCAAATGTCAAGCCAATCATCAATGGAAAACATGTTAGGTTGCTCAAAAGAAGAACAAGAAAGAAAACCAAAACCTCAGCCAGAACATGCTTTGAATTGTCCAAGATGTAACTCAACCAATACCAAATTTTGTTACTACAACAATTATAGTCTTACTCAACCAAGATACTTTTGCAAATCTTGTAGAAGATATTGGACAAAAGGTGGAACATTAAGGAATGTTCCGGTTGGTGGTGGATGTCGAAAAAACAAACGATCATCATCGTCTTCGTCTTCAAAGAGGGTCCAAGATCAAAACCAAACATTCACACCTAATCTTAACCCTTTTAATAATCTTCCTCTTTCATCTTATGATCATAATTCCAATGATTTTGCATTAGCATTTGCTAGGCTTCAAAAACAATCATGTGGACAAATGGGTTATGATGATAATGATCTTTCAATTTTGGGTAATCCTCAAAATCATGGATTTATGGATGCAATTAGAAGTGGATTATTTCTTGGAAATGGATTACATTATAATAATAATGTTCAAAACATGTATGGTGGGTATGGAAATGGAGGAGATAATGGTGAAGTGAATAGTTGCAACAACAATAGCAACAATGCTTGTGGGGTTAGTGAAGAAATGATGTTTCCTTATGATCAAGAAATGAACAATTGCATTGCAACAACTAACATGAAGCAAGAACAAAGTGAAAGTAAGGTTTTTGGTGGGTTTCCATGGCAACTAAATGGAGGGACAAACATGGTTGAACTTGAATCAACAAGAGCAAGTTGGAATAATGGTTTCACATCTCCTTGGCAAGGACTTCTTCATAGTCCCCTAATGTAG 870 0.3552 MDIMDPSCGQTQQMSSQSSMENMLGCSKEEQERKPKPQPEHALNCPRCNSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSSSKRVQDQNQTFTPNLNPFNNLPLSSYDHNSNDFALAFARLQKQSCGQMGYDDNDLSILGNPQNHGFMDAIRSGLFLGNGLHYNNNVQNMYGGYGNGGDNGEVNSCNNNSNNACGVSEEMMFPYDQEMNNCIATTNMKQEQSESKVFGGFPWQLNGGTNMVELESTRASWNNGFTSPWQGLLHSPLM* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g4348 289 Pfam Dof domain, zinc finger 41 97 IPR003851 GO:0003677|GO:0006355
Tpr7g4348 289 MobiDBLite consensus disorder prediction 1 25 - -
Tpr7g4348 289 MobiDBLite consensus disorder prediction 88 119 - -
Tpr7g4348 289 MobiDBLite consensus disorder prediction 1 42 - -
Tpr7g4348 289 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Tpr7g4348 289 MobiDBLite consensus disorder prediction 94 119 - -
Tpr7g4348 289 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 10 288 - -
Tpr7g4348 289 MobiDBLite consensus disorder prediction 26 40 - -
Tpr7g4348 289 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Tpr7g4348 289 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 288 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g4348 Tpr-Chr7 52243526 52245915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g4348 41 289 C2C2-Dof Transcription Factor Family AT2G28510 47.710 3.37e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Tpr7g4348 zf-Dof 3.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g4348 - - gmx:778106 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4348 7 52243526 52245915 Tpr4g1747 4 18014968 18017203 PCT