Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3537 ATGGATCCTGATGCTGTTGAAATTCCTCCGCAGAAACAGACCGTTTTTCATGATGTGATTGACCTTGAAGGTGAAACATCTCATAAAAGAACAAATAAGGGGAAGGCAGTGGTTCCACCAGGGTCGACGACAATCACTAATGAAACTTTGAAGAAACTTCAAAGTTTTAAGCAATTTGACATTGTCGTTGACACTTCCGACCATCACTATGTTACAAATAATTCCTCCACAAAGCAAAATCCAACGAGTTGGGCTAAAAGAATCCAAGAAGAGTGGAAGATTTTGGCGAAGCATTTGCCGGAAACAATATTTGTGAGAGTTTTCGAATCAAGGATGGATCTCTTGAGGGCAGTGATTGTTGGAGCAGAAGGTACACCTTACCACGACGGTCTTTTCTTTTTCGATGTTCAATTTCCCAGTGGCTATCCCAATGTACCCCCGTTAGTCTACTATCACTCTAGAGGTGTTAGGCTCAACCCGAATTTGTATGAGTGTGGCAAAGTATGTCTCAGTCTACTTAACACCTGGGATGGCGAAACAAATGAGATGTGGACTCCAGGTGTTTCAACAATGCTACAGGTTCTAGTCTCCATACAAGGTCTAATCTTGAATTCAAAGCCTTTCTTTAATGAGCCTTTTATTGGAATTATGAGTGGCACACAAATTGGTGAAGCATGGTCCCTGAAGTATAGTGAATATACATTCATTCAATCAGTAAGGACAATGATGTATACGGTAAAAAAGCCTCCAAAGAATTTTGAAGAACTTGTTGTGGGGCATTTCTACAGTCGAGCACATGATATTCTGGCGTCATGTAAAGCGTACATGGAAGGTGTTCAGGTTGGTTGTTTTGTGAAAGGCGGGGTTCAAGATGATGATAATGGTGGACGAAAAAGCTCAGATATTTTTAAGGCTAGATTACTTGGATATGTCAAGCTTCTTGTCCAAGTTTTTGAAAAAATTGGAGTTAAGGATTGTCAGAAATTCATTTTTCCGAATTCTCCGAAACCAACTCTTTTGAAAAAACTGTTTTCAAGTTGTTTTTTAGACTTAATTGTAGTTTTTGCCTCTTCTTAA 1077 0.3937 MDPDAVEIPPQKQTVFHDVIDLEGETSHKRTNKGKAVVPPGSTTITNETLKKLQSFKQFDIVVDTSDHHYVTNNSSTKQNPTSWAKRIQEEWKILAKHLPETIFVRVFESRMDLLRAVIVGAEGTPYHDGLFFFDVQFPSGYPNVPPLVYYHSRGVRLNPNLYECGKVCLSLLNTWDGETNEMWTPGVSTMLQVLVSIQGLILNSKPFFNEPFIGIMSGTQIGEAWSLKYSEYTFIQSVRTMMYTVKKPPKNFEELVVGHFYSRAHDILASCKAYMEGVQVGCFVKGGVQDDDNGGRKSSDIFKARLLGYVKLLVQVFEKIGVKDCQKFIFPNSPKPTLLKKLFSSCFLDLIVVFASS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3537 358 SMART ubc_7 86 246 - -
Tpr7g3537 358 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 34 331 - -
Tpr7g3537 358 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 83 243 IPR000608 -
Tpr7g3537 358 CDD UBCc 86 233 IPR000608 -
Tpr7g3537 358 Pfam Ubiquitin-conjugating enzyme 87 206 IPR000608 -
Tpr7g3537 358 SUPERFAMILY UBC-like 68 250 IPR016135 -
Tpr7g3537 358 Gene3D Ubiquitin Conjugating Enzyme 44 307 IPR016135 -
Tpr7g3537 358 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 34 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3537 Tpr-Chr7 43942984 43946462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3537 33 334 Miscellaneous Gene Families AT2G33770 47.697 9.40e-85 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3537 7 43942984 43946462 Tpr7g2043 7 25453535 25459204 PCT