Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3472 ATGGAGAGTGAGTGGAAAGCTAATGAGATATCACCAAATTGTCCAAGATGTGGTTCATCCAACACAAAATTCTGCTACTACAATAACTACAGTTTAACTCAACCAAGATACTTTTGCAAAGGATGCAGAAGGTATTGGACAAAAGGTGGATCCCTCAGAAATGTTCCTGTTGGTGGTGGCTGCAGAAAAAACAGAAGAGGTAACAACAAAACCTTATTAAGACAACAATCCTTTGATTCTCTCACTTTCAAAAATTCTGATACAATTGGTCATCATTCTTATGATCCTATTTTGAGGACTAATAATATTATTTCATCTTCTTCTTGCTCCTCATTGGTGAATACTGATAGACCAAATATTGATCTTGCATTAGTTTATGCAAATTTCCTCAATAAAAAGCCTGATTCTCAGAACAATTCTGATCAAATGGATAAAAGACCTTTTGATCCTTCTTTAGAAAATTCAAGGCTATCAAATGTTGAAGTTGGTACAAGTAGTTTCAATTTGTCTGAAATAGAAATTGGTCTCAAAGGATGTTTGAATCTTAATCAAGAACAATTACCATCCACAATAACAAATTTTAGTGAGGTTGAGAATAATCAAATGTATTGTAATGAGTTTCATTCTATGGAGATTCTTCAGAACATCCAACTGAAAGGTTTTGTTGGCCGACTGGACCAACTGGACCAAACATACGTTGGCCGATTCTCTTCATGTTGTTGCATATTTGTTTTGTTTACATACTCATTATATGTAGTTGTGTATAGAATATGGTTTTTATTACTACAAAATAATTTGAAATTCTAA 807 0.3321 MESEWKANEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNNKTLLRQQSFDSLTFKNSDTIGHHSYDPILRTNNIISSSSCSSLVNTDRPNIDLALVYANFLNKKPDSQNNSDQMDKRPFDPSLENSRLSNVEVGTSSFNLSEIEIGLKGCLNLNQEQLPSTITNFSEVENNQMYCNEFHSMEILQNIQLKGFVGRLDQLDQTYVGRFSSCCCIFVLFTYSLYVVVYRIWFLLLQNNLKF* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3472 268 Pfam Dof domain, zinc finger 13 66 IPR003851 GO:0003677|GO:0006355
Tpr7g3472 268 ProSiteProfiles Zinc finger Dof-type profile. 12 66 IPR003851 GO:0003677|GO:0006355
Tpr7g3472 268 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 1 217 - -
Tpr7g3472 268 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 217 IPR045174 GO:0003700|GO:0006355
Tpr7g3472 268 ProSitePatterns Zinc finger Dof-type signature. 14 50 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3472 Tpr-Chr7 43102991 43103878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3472 5 135 C2C2-Dof Transcription Factor Family AT3G52440 57.353 3.20e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Tpr7g3472 zf-Dof 3.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g3472 - - aprc:113871380 241.506