LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g3376	ATGGAAGCATTATGTGCAATATCAGTATGCATAATCCTTTTAGCAACCCTTGTTTGGGCATGGAAAATGTTGATATGGTCATGGCTAAGACCCAAGAAGCTAGAAAAGTTGTTAAGAGAACAAGGCCTTAAAGGGAACCCATATAAGCTTTTAGTTGGAGACATGAAAGAGTTTATGAAGATGCAAAAGGAAGCAAGATCCAAACCCATGCCTCTATCTGATGATATAGTTCCCCATGTGTTTCCCTTTGGTAACCAAAGTGTTGCTAAACATGGGAAGAATTCTTTTATGTGGTTTGGACCAACACCAAGGGTGATCCTAACAGATCCTGAGTTAGTTAAAGAAGTTTTCAATAAGATCTACGACTTCCAAAAGCCTAATAATAATCCTCTTGTCAGAATACTAGCTACTGGTCTTATAATCCACGAGGGAGAAAAGTGGAATAAGCATAGAAAGATAATTAATCCTGCATTCAATTTAGAAAAATTGAAGATGATGTTACCAATATTCTTCGAAAGTTGTAATGATCTGATTAGAAAATGGGAGGGAATGTTATCATCAGATGGATCATGTGAAATTGATGTGTGGCCTTCCATTCAAAATTTGTCAAGTGATGTTATTGCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGAGTGAAAATATTTCAACTTCAAAAGGAACAAGCTGAACTTACCATGGAAGTTTTGACGAAGATTTATATCCCTGGTTGGAGGTATCTACCCACTAAGACAAACAAAAGGTTGAAGGAAATTGACAGGTATATAATAGCTTCCTTGACTGATATGATTAACAAGAGAGAAAGAGAAATAAAGGCAGGTGAAGCCACTAAGAATGACTTATTAGGAATTCTTCTTGAATCAAATCACAAGGAAATTGAAGAAAACAACAACAATAAAAATGTTGGAATGAATCTTGATGATGTGATCAAGGAATGCAAGCTTTTCCACCTTGCAGGGGAAGAAACCACTTCAGTTTTGCTTGTTTGGACAATTCTATTATTGAGTAGGTACCCTAATTGGCAAGCACATGCAAGGGAGGAAGTTCTACAAGTTTTTGGCAACAAAAAACCAGATTTTGAAGGACTAAGTCATCTTAAGATTGTTACCATGATTTTGTACGAGGTTCTAAGGTTATATCCACCGGTAGTTATGATTCCTCGGGCCGTTTACAAAGATGTAAAAGTCGGGAACCTAACATTACCGGCTGGAGTACAAATTGCCTTACCAATAGCTTGGCTTCACCATGACTCTGAACTATGGGGTGATGATTCTAACGTGTTCAATCCTGAGAGATTTTCTGGAGGAATTTCCAAAGCATCAAATGGTAAAATTTCATTTTTTCCATTTGGTTGGGGTCCTAGAAGTTGCATTGGACAAAATTATTCCATGTTGGAAGCAAAGATGGCAATAGCATTGATTTTGCAACATTTCTCATTTGAACTTTCTCCAACTTATGCTCATGCTCCAGCTTCAGTAATAACTCTTCAGCCACTATATGGTGCTCATATCATTCTCCATAAATTGGAAATATAA	1557	0.3693	MEALCAISVCIILLATLVWAWKMLIWSWLRPKKLEKLLREQGLKGNPYKLLVGDMKEFMKMQKEARSKPMPLSDDIVPHVFPFGNQSVAKHGKNSFMWFGPTPRVILTDPELVKEVFNKIYDFQKPNNNPLVRILATGLIIHEGEKWNKHRKIINPAFNLEKLKMMLPIFFESCNDLIRKWEGMLSSDGSCEIDVWPSIQNLSSDVIARTAFGSSYEEGVKIFQLQKEQAELTMEVLTKIYIPGWRYLPTKTNKRLKEIDRYIIASLTDMINKREREIKAGEATKNDLLGILLESNHKEIEENNNNKNVGMNLDDVIKECKLFHLAGEETTSVLLVWTILLLSRYPNWQAHAREEVLQVFGNKKPDFEGLSHLKIVTMILYEVLRLYPPVVMIPRAVYKDVKVGNLTLPAGVQIALPIAWLHHDSELWGDDSNVFNPERFSGGISKASNGKISFFPFGWGPRSCIGQNYSMLEAKMAIALILQHFSFELSPTYAHAPASVITLQPLYGAHIILHKLEI*	519

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g3376	518	PRINTS	E-class P450 group I signature	88	107	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	PRINTS	E-class P450 group I signature	202	220	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	PRINTS	E-class P450 group I signature	315	332	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	PRINTS	E-class P450 group I signature	335	361	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	PRINTS	E-class P450 group I signature	454	464	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	PRINTS	E-class P450 group I signature	464	487	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	Pfam	Cytochrome P450	89	492	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	Gene3D	Cytochrome P450	76	515	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	PANTHER	CYTOCHROME	11	512	-	-
	Tpr7g3376	518	SUPERFAMILY	Cytochrome P450	80	514	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	457	466	IPR017972	GO:0005506\|GO:0016705
	Tpr7g3376	518	PRINTS	P450 superfamily signature	326	343	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	PRINTS	P450 superfamily signature	378	389	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	PRINTS	P450 superfamily signature	455	464	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	PRINTS	P450 superfamily signature	464	475	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr7g3376	518	PANTHER	CYTOCHROME P450 FAMILY MEMBER	11	512	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr7g3376	Tpr-Chr7	41940630	41945309	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g3376	3	516	Cytochrome P450	AT3G14690	55.146	0.0	625

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr7g3376	7	41940630	41945309	Tpr7g3376	7	41940630	41945309	ECH