Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3301 ATGGTGTTATTATCCAAACCAACAACAGAACAATTCACCTATGTTAGAAACAACAACATGTCTACCACATTTTCATCATCAATTCCTCTTGTTGACCTCTCAAAACCAGATGCAAAGAATCTCATAGTAAAAGCTTGTGAAGATTTTGGTTTCTTCAAAGTCATAAACCATGGAATCCCTATGGAAGCTATATCCCAATTAGAATCTGAAGCCTTCAAATTTTTCTCTCTGCCTCTAACAGAGAAAGAAAAAGCAGGGCCTGCAAATCCATTTGGATATGGTAACAAAAAAATTGGACTCAATGGTGATGTTGGTTGGGTTGAATACCTTCTTCTCACCACCAATGAAGAACACAATTTCAAACTTTATGGAAGAGACATAGAAAAATTTAGGTGTTTGTTGAAAGATTATAAGTGTGCTATGAGAAATATGGCATGTAAGATACTTGATTTGATGGCAGAAGGGCTAAAGATTCAACCAAAGAATGTCTTTAGCAAGCTTGTGATGGATAAACAGAGTGACTCTATTTTTAGGGTTAATCATTATCCTGCTTGTCCTGAATTAGCGATAAATGGTAAGAATTTGATTGGATTTGGAGAACATACAGATCCTCAAATTATTTCACTTTTGAGGTCAAACAATACATCGGGATTTCAAATTTCTCTTAGAGATGGAACCTGGATTTCAGTTCCACCTGATCATAGCTCGTTCTTCATCAATGTTGGTGATTCTCTTCAGGTTATGACTAATGGAAGGTTCAAAAGTGTGAGACATAGAGTTTTGGCAAATGGTATCAATCCAAGGCTCTCAATGATTTATTTTGGTGGACCACCTTTGAGTGAGAAAATAGCACCATTACCTTCACTCATGAAAGGAAAAGAAAGCTTGTATAAAGAATTTACATGGTTTGAGTACAAGAATTCAACTTATGGTTCAAGATTGGCTGATAATAGGCTTGGAAATTATGAGAGGATTGCTGCCTCCTAA 987 0.3597 MVLLSKPTTEQFTYVRNNNMSTTFSSSIPLVDLSKPDAKNLIVKACEDFGFFKVINHGIPMEAISQLESEAFKFFSLPLTEKEKAGPANPFGYGNKKIGLNGDVGWVEYLLLTTNEEHNFKLYGRDIEKFRCLLKDYKCAMRNMACKILDLMAEGLKIQPKNVFSKLVMDKQSDSIFRVNHYPACPELAINGKNLIGFGEHTDPQIISLLRSNNTSGFQISLRDGTWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGINPRLSMIYFGGPPLSEKIAPLPSLMKGKESLYKEFTWFEYKNSTYGSRLADNRLGNYERIAAS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3301 328 Pfam 2OG-Fe(II) oxygenase superfamily 174 275 IPR044861 -
Tpr7g3301 328 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 324 - -
Tpr7g3301 328 Pfam non-haem dioxygenase in morphine synthesis N-terminal 28 114 IPR026992 -
Tpr7g3301 328 Gene3D - 4 314 IPR027443 -
Tpr7g3301 328 PRINTS Isopenicillin N synthase signature 42 59 - -
Tpr7g3301 328 PRINTS Isopenicillin N synthase signature 201 222 - -
Tpr7g3301 328 PRINTS Isopenicillin N synthase signature 237 263 - -
Tpr7g3301 328 SUPERFAMILY Clavaminate synthase-like 27 320 - -
Tpr7g3301 328 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 172 277 IPR005123 -
Tpr7g3301 328 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 1 10 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3301 Tpr-Chr7 40923387 40926057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3301 31 274 Glycosyltransferase AT5G59530 26.641 2.80e-22 94.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3301 7 40923387 40926057 Tpr7g3301 7 40923387 40926057 ECH