Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3272 ATGGCTGATGAAGTGATTCTGCTAGATTTCTGGCCAAGTCCATTTGGTATGAGAATCAGAATAGCACTTGCTGAAAAGGGTATTAAATATGAGTATAAAGACGAAGACTTGAAGAACAAAAGCCCTTTGTTGCTACAAATGAACCCTGTTCATAAGCAAATCCCTGTTCTTGTTCACAACGGTAAACCGATTGCTGAATCTCTTATTGCTGTTCAGTATATTGATGAGGTTTGGAATGATAAATCTCCTTTGTTGCCTTCTGATTCTTATGGAAGAGCACATGCTAGATTCTGGGCTGATTATGTTGACAAGAAGATACATGAAGTTGGATTGAAGCTTTGGAGGACCAACAAAGGAGAAGAACAAGAAGCTGGCAAGAAGGAATTTATAGAAGTCCTCAAATTGTTAGAGCAAGAGTTGGGAGACAAACCTTATTTTGGAGGAGACAAGCTTGGCTATGTGGATATAGCATTCATCCCATTCTATACTTGGTTTAAAGCCTATGAGACCTTTGGCAACCTTAATATAGAGAAGGAATGCCCCAAGATTCTCTCTTGGGCTAAGAGATGTATTAAGATTGAGAGTGTTTCCAAGTCTCTTCCTGATCAGGATAAGGTCTATGACTTCATTGTAGAAATGAGGAAGAACTTGGGCATTGAATAG 663 0.3906 MADEVILLDFWPSPFGMRIRIALAEKGIKYEYKDEDLKNKSPLLLQMNPVHKQIPVLVHNGKPIAESLIAVQYIDEVWNDKSPLLPSDSYGRAHARFWADYVDKKIHEVGLKLWRTNKGEEQEAGKKEFIEVLKLLEQELGDKPYFGGDKLGYVDIAFIPFYTWFKAYETFGNLNIEKECPKILSWAKRCIKIESVSKSLPDQDKVYDFIVEMRKNLGIE* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3272 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Tpr7g3272 220 Gene3D - 88 220 - -
Tpr7g3272 220 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Tpr7g3272 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 209 IPR010987 -
Tpr7g3272 220 CDD GST_N_Tau 5 78 - -
Tpr7g3272 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Tpr7g3272 220 Gene3D Glutaredoxin 1 87 - -
Tpr7g3272 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 214 IPR045073 -
Tpr7g3272 220 SFLD Main (cytGST) 2 217 - -
Tpr7g3272 220 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Tpr7g3272 220 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 214 - -
Tpr7g3272 220 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Tpr7g3272 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Tpr7g3272 220 Pfam Glutathione S-transferase, C-terminal domain 123 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3272 Tpr-Chr7 40457242 40459610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3272 1 217 Glutathione S-transferase Gene Family AT1G78380 68.203 4.40e-113 320
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3272 7 40457242 40459610 Tpr7g3272 7 40457242 40459610 ECH