Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3249 ATGCTGATTTTAGTTGGAAATTTGCAAGGAACAATGAGTTATCTTGCTGCACCAGTGAGTTTAGGTAGTTTCAATGGTGTGAGTAGTTCTTGTATAAGGTCACATTCTGTTGTTAGAAGAATTTCTGTTTCTAGAGGGAATTGTAATAATAAAGGGAAAAAAAGATGGCATTGTGTTTCTTTATCTGTTTGTAGATATTCAGTTACTACAACTGATTTTGTTGCTAACCAAGGAAATTCAGTTTCTCTTGATTCTACTAACATTGATGGTGATAATAAAGGTGGTGATAGTGGTGGTAGTGTTGGTGGTGGTGGTGGTTTTGTTCTTAAACCTTCTCCTAAGCCTGTTTTAAAGTCCTCTAGTAATGATGTGGATGAGAGGACTAAGGTGATTGAATCACTTGGAGAGGTTTTGGAGAAGGCTGAAAAGCTTGAAAATTCTAAGTTGGATGGTGAAAGAAGTAACGGTTCGGTAAGTATACCGGAAAGACCCGAGACGGATGTTAAAGCGGAGATAAATGTTAAACCTAAGGATGATAATCCGGTAAATTCGTTACAAAAACATAAGTCTAAGACATTGAAGAGTATATGGCGTAAAGGGGACTCGGTTGCAAGTGTGCAGAGAGTTATAAAGGAAGTACCTAAGCCTAGTTTCAAGAGAAGTGAAGTGAGGGAATCACAGATAGTGGGAGAGGAGAAGGTAACACCTCAGTCTAGTAATCCCCAACCTCCTTCGAGACCTCAACCGACATTACTGTCTAGGCCTTCTATAGCGCCGCCGCGCCCACCACCCCCGCCATTGGTTAAAAAGCCTGTTATCTTGAAGGATGATAGAGGGCAAGGTGAAACACCTGTTAAAAAGTCTGTTATCTTGAAGGATGATAAAGGAGAAGTTGTAAAAGGGGAAATTGAAACACCTGTTACGTCTAAAGAAAGGAAGGGACCTATCTTGATTGATAAGTTTGCTACAAAGAAACCGGAAGTTGACCCTGTGATTGCTGGATCTGTTATGGCTCCTCCGAAACCAGGGATGGCTCCTCCGAAACCAGGGAAGGCCCCTCCCCAAGGAAGGTTTAGAGATGATTACCGGAAGAAAGGTGCTTCGTCAGGAGCAGGACCAAGAAGACGAGTGGCGGTGAATGACGATGATAGTGGCGGTGCTACAAGAAAAGGAAGGAAATGGAGTAAAGCAAGTCGTAAGGCGGTACGACTTCAAGCTGCCAGGGAAGCTGCTCCTGTAAAAGTTGAAATTCTAGAGGTCAGTGACAAAGGTATGCTGGTGGAGGAGTTGGCATACAATTTGGCGACCACTGAAGGTGAAATCCTCGGTTCTCTGTACTCCAAAGGAATTAAACCAGATGGGGTGCAAACTCTAGACAAGGATATGGTAAAGATGATTTGTAAAGAATATGATGTGGAAGTCATCGATGCCGATCCTTTCAAAGTTGAAGGATTAGTGAATAGACGGGAAATTCTCGAGGAAGATGACCTCGACAAACTCAAAGACAGACCTCCTGTTATTACTATCATGGGCCATGTAGATCACGGCAAAACAACTCTGTTGGATCATATAAGGAAGACCAAGGTAGCTGCTTCTGAAGCTGGTGGGATCACACAAGGAATTGGGGCTTATAAAGTGCAAGTACCTGTTGATGGAAAAACGTTGCCGTGTGTTTTTCTCGACACTCCTGGGCACGAGGCATTTGGGGCAATGAGAGCCCGTGGAGCAAGCGTAACAGACATTGCTATTATTGTTGTGGCTGCTGATGATGGTATTCGTCCACAAACAAGTGAAGCTATAGCTCATGCCAAAGCAGCAGGAGTACCCCTTATAATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCAGATCGTGTTATGCAAGAGCTTTCTTCAATTGGTCTGATGCCAGAAGACTGGGGTGGTGACGTCCCGATGGTTCAGATAAGTGCTCTTCAAGGGCAGAATGTAGATGATCTTTTGGAAACAGTTATGCTTGTTGCCGAGATGCAAGAACTGAAAGCTAATCCTGATAGAAGTGCAAAGGGAACAGTCATTGAGGCAGGCTTGGATAAATCAAAAGGACCATTTGCTACATTTATTGTGCAGAATGGATCACTTAAAAGGGGTGATGTAGTAGTTTGTGGAGGATCTTTTGGAAAGGTGCGAGCTTTATTCGATGATGGTGGAAAGCGTGTTGATGAAGCTACACCTTCGATACCTGTACAGGTTATTGGATTGAATAATGTTCCAGTTGCTGGTGATGTATTTGAGGTTGTTGATTCCCTTGATACTGCACGTGAAAAGGCAGAGTCCCGTGTTATGTCATTGCGAGATGAGCGTATTTCAGCAAAGGCAGGAGATGGCAAGGTCACCCTTTCTTCACTAGCTTCTGCAGTTTCGTCAGGAAAGCTTTCCGGATTAGACTTGCACCAATTGAATATTATTTTGAAGGTTGATCTTCAGGGATCCATTGAAGCCGTCAAACAAGCCCTGCAGGTGCTACCACAAGATAACGTCACACTGAAGTTTTTGATGGAAACAACAGGTGATATAAGCACAAGTGACGTTGACCTTGCGTATGCAAGCAAAGCGATCATTTTTGGATTTAATGTCAAAGCACCAGGCTCTGTGAAAAGCTATGCAGATAATAAAGCCGTTGAGATAAGATTATATAGAGTTATTTATGAATTAATTGATGATGTACGACAAGCAATGGAAGGGCTCCTAGATTCTGTTGAGGAACAAGTACCAATTGGTGCAGCAGAAATACGGGCCGTATTCAGCAGTCGTAGTAGTCGTGTTGCTGGATGTATGGTTACAGAGGGAAAGGTTACAAAAGGCTGTGGTATTCGAGTCGTTCGGAAGGGAAAAGTAGTTCATGTTGGTATTCTTGATTCTTTGAAACGGGTGAAAGAGATTGTTAAAGAGGTAAATGCCGGTCTTGAGTGTGGTATTGCACTAGAAGACTACGATGATTGGCAAGAGGGTGATATTCTTGAAGCCTTCAACACAATTGAGAAGAGAAGAACCCTTGAAGAAGCCTCAGCATCAATGGCAGCCGCCGTGGAGGGAGTAGGATCTTAA 3090 0.4307 MLILVGNLQGTMSYLAAPVSLGSFNGVSSSCIRSHSVVRRISVSRGNCNNKGKKRWHCVSLSVCRYSVTTTDFVANQGNSVSLDSTNIDGDNKGGDSGGSVGGGGGFVLKPSPKPVLKSSSNDVDERTKVIESLGEVLEKAEKLENSKLDGERSNGSVSIPERPETDVKAEINVKPKDDNPVNSLQKHKSKTLKSIWRKGDSVASVQRVIKEVPKPSFKRSEVRESQIVGEEKVTPQSSNPQPPSRPQPTLLSRPSIAPPRPPPPPLVKKPVILKDDRGQGETPVKKSVILKDDKGEVVKGEIETPVTSKERKGPILIDKFATKKPEVDPVIAGSVMAPPKPGMAPPKPGKAPPQGRFRDDYRKKGASSGAGPRRRVAVNDDDSGGATRKGRKWSKASRKAVRLQAAREAAPVKVEILEVSDKGMLVEELAYNLATTEGEILGSLYSKGIKPDGVQTLDKDMVKMICKEYDVEVIDADPFKVEGLVNRREILEEDDLDKLKDRPPVITIMGHVDHGKTTLLDHIRKTKVAASEAGGITQGIGAYKVQVPVDGKTLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTSEAIAHAKAAGVPLIIAINKIDKDGANPDRVMQELSSIGLMPEDWGGDVPMVQISALQGQNVDDLLETVMLVAEMQELKANPDRSAKGTVIEAGLDKSKGPFATFIVQNGSLKRGDVVVCGGSFGKVRALFDDGGKRVDEATPSIPVQVIGLNNVPVAGDVFEVVDSLDTAREKAESRVMSLRDERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVKQALQVLPQDNVTLKFLMETTGDISTSDVDLAYASKAIIFGFNVKAPGSVKSYADNKAVEIRLYRVIYELIDDVRQAMEGLLDSVEEQVPIGAAEIRAVFSSRSSRVAGCMVTEGKVTKGCGIRVVRKGKVVHVGILDSLKRVKEIVKEVNAGLECGIALEDYDDWQEGDILEAFNTIEKRRTLEEASASMAAAVEGVGS* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3249 1029 Coils Coil 761 781 - -
Tpr7g3249 1029 MobiDBLite consensus disorder prediction 354 368 - -
Tpr7g3249 1029 CDD IF2_eIF5B 505 671 - -
Tpr7g3249 1029 MobiDBLite consensus disorder prediction 164 185 - -
Tpr7g3249 1029 MobiDBLite consensus disorder prediction 145 290 - -
Tpr7g3249 1029 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 502 675 IPR000795 GO:0003924|GO:0005525
Tpr7g3249 1029 Gene3D - 810 914 IPR036925 -
Tpr7g3249 1029 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 40 1021 - -
Tpr7g3249 1029 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 40 1021 IPR015760 -
Tpr7g3249 1029 SUPERFAMILY Translation proteins 678 761 IPR009000 -
Tpr7g3249 1029 MobiDBLite consensus disorder prediction 271 290 - -
Tpr7g3249 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 494 678 IPR027417 -
Tpr7g3249 1029 CDD IF2_mtIF2_II 682 774 IPR044145 -
Tpr7g3249 1029 Hamap Translation initiation factor IF-2 [infB]. 7 1011 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Tpr7g3249 1029 Pfam Translation-initiation factor 2 810 903 IPR023115 -
Tpr7g3249 1029 ProSitePatterns Initiation factor 2 signature. 964 986 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Tpr7g3249 1029 MobiDBLite consensus disorder prediction 337 398 - -
Tpr7g3249 1029 MobiDBLite consensus disorder prediction 376 390 - -
Tpr7g3249 1029 Gene3D Translation factors 915 1012 - -
Tpr7g3249 1029 Gene3D Translation factors 678 794 - -
Tpr7g3249 1029 SUPERFAMILY Translation proteins 917 1011 IPR009000 -
Tpr7g3249 1029 MobiDBLite consensus disorder prediction 213 229 - -
Tpr7g3249 1029 PRINTS GTP-binding elongation factor signature 506 519 IPR000795 GO:0003924|GO:0005525
Tpr7g3249 1029 PRINTS GTP-binding elongation factor signature 558 568 IPR000795 GO:0003924|GO:0005525
Tpr7g3249 1029 PRINTS GTP-binding elongation factor signature 574 585 IPR000795 GO:0003924|GO:0005525
Tpr7g3249 1029 PRINTS GTP-binding elongation factor signature 610 619 IPR000795 GO:0003924|GO:0005525
Tpr7g3249 1029 TIGRFAM small_GTP: small GTP-binding protein domain 504 665 IPR005225 GO:0005525
Tpr7g3249 1029 MobiDBLite consensus disorder prediction 240 270 - -
Tpr7g3249 1029 TIGRFAM IF-2: translation initiation factor IF-2 423 1013 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Tpr7g3249 1029 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 809 921 IPR036925 -
Tpr7g3249 1029 CDD mtIF2_IVc 921 1003 - -
Tpr7g3249 1029 Pfam Elongation factor Tu GTP binding domain 507 668 IPR000795 GO:0003924|GO:0005525
Tpr7g3249 1029 MobiDBLite consensus disorder prediction 97 125 - -
Tpr7g3249 1029 Gene3D - 499 677 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3249 Tpr-Chr7 40247745 40254812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3249 503 901 Eukaryotic Initiation Factors Gene Family AT1G76810 29.185 6.72e-28 120
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3249 7 40247745 40254812 Tpr7g3249 7 40247745 40254812 ECH