Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3202 ATGGCCGTTGAATCTCGCCATCTTCATCTCTTCTCCCCTCAACTCATAACCAACCGAGAAATGATGAACCCTGTTGAAACAAACATGAACAACATCTACAACAACATATCACAAATGGGTTACTCATCAATTCCACCATCTTCAATCAAAACAACCGCAACGGAGACACTAATCCTACCACCTTACAACTCCATAACAACCGATTCATTACCTCAAAAAACAGCTATGAACTCCGACAGCGGTTTAACTTATAATGTTCCTTTAAGAAAACGTTCTAGAGATTCTAGAGACTATTCAAATTCAATCAATTTTCCTTTCCCAAATTCTTATCTTTCTCCTACAACATTAACAACTCAACAAAACAACAACAACAACAACAGAAGTTGTGCCTCTTCATCGTTCTCTTTTCTTGGTGAAGATATTTCTGTTCAGATCCAGGGACAACAACTTGATATTGATCAACTCATTGCACAACAAATGGAGAAAGTGAAATATGAGATTGAAGAAAAAAGGAAGAGACAAGCGATGAGGTTGATTCAAGCTATTGACATGAGTGTGACAAAGAGATTGAAAGCAAAAGAAGAAGAAATTGAGAAAATTGGGAAAATGAATTGGGCTTTAGAAGAAAGAGTGAAGTCACTTTGCATGGAGAATCAAATATGGCGTGATTTAGCACAAAGCAATGAAGCAACAGCCAATGCTTTAAGGTCCAATCTAGAACAACTTCTTGCACAACGCGGCGGCGGAGATGAAAATGGCGAAATTTCTCCGGCGGGTATGGCGGGTGCTTTAATGGATGATGCAGAGTCATGTTGTGATAGCAATGAGAGTATTAATGATGATGGAAATGCTGTGGATCAATGGAGAAATTTAGGAGATAATAATAATGGTAAGAGAATTGAAGTGATGAAGGTTATGGGAAACTCATGTGGTGGTGAAAGTGGAAGCAATTTTGTGAATAGCATGAAACTGTGCAGTAACTGTGGGAAAGATGAATCTTGTGTGTTGATTTTGCCTTGTAGACATCTTTGTTTATGTGGTGTTTGTGGGTCTTCTCTTAACATTTGTCCTATTTGTAAATCTTGTAAAACTGCTAGTATCCATGTTAACATGTCTTGA 1119 0.3789 MAVESRHLHLFSPQLITNREMMNPVETNMNNIYNNISQMGYSSIPPSSIKTTATETLILPPYNSITTDSLPQKTAMNSDSGLTYNVPLRKRSRDSRDYSNSINFPFPNSYLSPTTLTTQQNNNNNNRSCASSSFSFLGEDISVQIQGQQLDIDQLIAQQMEKVKYEIEEKRKRQAMRLIQAIDMSVTKRLKAKEEEIEKIGKMNWALEERVKSLCMENQIWRDLAQSNEATANALRSNLEQLLAQRGGGDENGEISPAGMAGALMDDAESCCDSNESINDDGNAVDQWRNLGDNNNGKRIEVMKVMGNSCGGESGSNFVNSMKLCSNCGKDESCVLILPCRHLCLCGVCGSSLNICPICKSCKTASIHVNMS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3202 372 Coils Coil 190 210 - -
Tpr7g3202 372 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 371 IPR017066 -
Tpr7g3202 372 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 312 372 IPR013083 -
Tpr7g3202 372 ProSiteProfiles Zinc finger RING-type profile. 325 360 IPR001841 -
Tpr7g3202 372 Coils Coil 225 245 - -
Tpr7g3202 372 PIRSF SBP1_RNase_bind 1 372 IPR017066 -
Tpr7g3202 372 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3202 Tpr-Chr7 39762338 39764162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3202 324 361 Miscellaneous Gene Families AT2G21380 39.474 3.74e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3202 7 39762338 39764162 Tpr7g3202 7 39762338 39764162 ECH
Tpr7g3202 7 39762338 39764162 Tpr7g1383 7 14780174 14781864 PCT