Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3184 ATGGGTTTTAACGAAGATTTCAACATGGATCATAATGAATATGTTGTTGATGATGATGAAGATGTTCCACTTCCTGGATTTAGATTCCATCCAACTGATGAAGAACTTGTTACTTTTTATCTTAGAAGGAAACTTGATAAGAAACCTATTGCTATTGATCTCATCAAACAAATTGATATATACAAATATGATCCTTGGGATCTTCCAAAATCAAGTGTACCTGGAGCAGAGAAAGAAGCATACTTTTTTTGCAAAAGAGGGAGAAAATATAAGAATAGCATAAGGCCAAATAGAGTAACTGGCTCTGGATTTTGGAAAGCAACAGGAATAGACAAACCAATATACTCAAATGGAGGAGAAGGAAAAGATTGTGTTGGACTCAAAAAAACACTTGTTTACTATCGTGGTAGTGCTGGCAAAGGCACTAAAACTGATTGGATGATGCATGAATTTCGTTTCCCTTCTAAAATTATTGATGCCAACACTAATCTTCCATATGCTAAGAATTTTGATGTTGATAATGCTCATGAAGCTGAAATTTGGACATTGTGTAGAATTTTCAAGAGAAATGTATCACAAAGAAAACCACAAATGGCAGAGGTGAAATCATTTGCTACCAAGCGTCAAGCCATTCAAGAAAAGAGAAGTAGAATGGATAGCAATATGGAGTTCAACATAAATCAACAAACATATATCAATTTTGGTGAAAGTCATGAGCAACATCACCACAATGAAGACAAACCAATTAATAACTATGCAATAAGTGATCAAAGGAATCAATTTCATGTAGATCAATTGAGCTCTTCAGTTCCACATCAACCTCAACAAAATAATGTAACACAATATTCAAATTTTTGGATTAACCAACCTGCAAATGAGTTATTATCATTTGATAATTGGGATGAGCTTGGATCAGTTGTAAAGTTTGCTGTTGATTCACCTAGTTTGTAA 951 0.3375 MGFNEDFNMDHNEYVVDDDEDVPLPGFRFHPTDEELVTFYLRRKLDKKPIAIDLIKQIDIYKYDPWDLPKSSVPGAEKEAYFFCKRGRKYKNSIRPNRVTGSGFWKATGIDKPIYSNGGEGKDCVGLKKTLVYYRGSAGKGTKTDWMMHEFRFPSKIIDANTNLPYAKNFDVDNAHEAEIWTLCRIFKRNVSQRKPQMAEVKSFATKRQAIQEKRSRMDSNMEFNINQQTYINFGESHEQHHHNEDKPINNYAISDQRNQFHVDQLSSSVPHQPQQNNVTQYSNFWINQPANELLSFDNWDELGSVVKFAVDSPSL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3184 316 SUPERFAMILY NAC domain 23 189 IPR036093 GO:0003677|GO:0006355
Tpr7g3184 316 PANTHER TRANSCRIPTION FACTOR JUNGBRUNNEN 1-LIKE 15 314 - -
Tpr7g3184 316 Gene3D NAC domain 32 193 IPR036093 GO:0003677|GO:0006355
Tpr7g3184 316 Pfam No apical meristem (NAM) protein 25 152 IPR003441 GO:0003677|GO:0006355
Tpr7g3184 316 ProSiteProfiles NAC domain profile. 23 189 IPR003441 GO:0003677|GO:0006355
Tpr7g3184 316 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3184 Tpr-Chr7 39558451 39560793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3184 15 189 NAC Transcription Factor Family AT5G39820 57.068 2.91e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g3184 NAM 4.2e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3184 7 39558451 39560793 Tpr7g3184 7 39558451 39560793 ECH