Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3181 ATGCCCCTATCTCCTTCTTCCATGGCTTCTTCAATCCCTCATCACTATTATTCAAACTACACTTCTGATCATTTCACCACACAACAACAAGGTTTGTCTTCACATAATAATAACATTATTAATACCTCAATTTTGGACAATACTATGATGTGGGGTTGTCAAGAAAATTTAATGCCTGTTTTTGATAATTATGGAGCATTTGATCAAATTGTGTCACTTGATTGTGATACTATGTCTTCTTCTGGTGCTTGGATTCATCCAAATTTTGTCGAGCAACAAGAATTCTCCGTTCCGGCTTTGTTATCGGATTGTAAAATGGGATTTTATGGTGGTGGGATTCAGAATTTTAATGGAAGATATATTAATCAACCACTTATTGGTCATGAGTTAGTAGAAGATCAATGTTGTGGTTTTGTTGAAGATATTAAACCACCTACACCTTATCCTAATGTTGCAAGAGAAAATTGGGGGATACAAGGTAATCAAATAACAGCAGTTGAAGAACCAAACATAAAGGTAGGAAGGTACTCAGAAGAAGAAAGGAAAGAAAGAATTCTTCGATATTTGAAGAAAAGAAACCAAAGAAATTTCAACAAAACTATTAAGTATGCATGTCGGAAAACTTTGGCTGATAGAAGAGTGAGAGTGAGAGGAAGGTTTGCAAGAAACAATGAGATATGTGAAGAAGATCACATGGCCACAAAAAAGCTTGAGAATCAACATGATGATCACATCAATGATGACTTTTATGGTTCTGAGTCATTCCAATTCCAGTTAAAGAATGAGGAGGAGGACTGGCTTCAAGAGGCTATGGCAAGTTTGGTGTATTTATCTCATTCATCACCGGAAGAATGA 855 0.3579 MPLSPSSMASSIPHHYYSNYTSDHFTTQQQGLSSHNNNIINTSILDNTMMWGCQENLMPVFDNYGAFDQIVSLDCDTMSSSGAWIHPNFVEQQEFSVPALLSDCKMGFYGGGIQNFNGRYINQPLIGHELVEDQCCGFVEDIKPPTPYPNVARENWGIQGNQITAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNEICEEDHMATKKLENQHDDHINDDFYGSESFQFQLKNEEEDWLQEAMASLVYLSHSSPEE* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3181 284 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 280 - -
Tpr7g3181 284 Pfam CCT motif 181 223 IPR010402 GO:0005515
Tpr7g3181 284 ProSiteProfiles CCT domain profile. 181 223 IPR010402 GO:0005515
Tpr7g3181 284 PANTHER ACTIVATOR OF SPOMIN::LUC2 8 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3181 Tpr-Chr7 39494080 39496736 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g3181 177 233 C2C2-CO-like Transcription Factor Family AT5G15850 45.614 7.38e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g3181 CCT 9e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3181 7 39494080 39496736 Tpr7g3181 7 39494080 39496736 ECH