Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3138 ATGGCCGCTTCTTCAATCCTCAGATCTGCCATCGTTGCCTCACCTTGCTCCTCCGATCGTTTCCAGGGCCTTTGCAATGCCTCAAGTATTAATTCAAAATCTACGAGGTTGCAAAGCAGCATATTTGGAACTTCAATTCTATGTGATTCATTAGTCTTACAAAATTGCAATGCCCGAAGCATGCAGCCTATCCGCGCTACAGCAACGGAAATCCCTCTCCCTGTACAAAAATCAAGCAGCACTGGGAAGACAAGAGTTGGAATAAATGGTTTTGGTAGAATTGGAAGGTTGGTGTTACGCGTAGCTACTTCCCGTGATGATATTGATGTTGTTGCAATTAATGATCCTTTTATTGATGCCAAATATATGGCTTACATGTTCAAGTATGACTCTACTCATGGACCATTTAGAGGAACTATTAAGGTTTTGGATGACACTACTTTGGAAATTAATGGGAAGCAAGTTAAAGTTGTGAGCAAAAGAGATCCTGTGGAGATCCCTTGGGGTGATTTTGGTGCTGATTATGTCATAGAGTCTTCAGGGGTTTTTACAACATTAGAGAAAGCTTCATCACATTTGAAGGGTGGTGCCAAGAAAATCATAATATCAGCTCCATCTGCTGATGCACCAATGTTTGTGGTAGGAGTGAACGAGAAGACATACAATCCCAGCATGGACATTGTTTCTAATGCAAGCTGTACAACAAATTGTCTTGCTCCTCTTGCCAAGGTGGTTCATGAAGAGTTTGGTATAATTGAAGGTTTGATGACAACTGTGCATGCAACAACAGCAACACAAAAGACAGTAGATGGTCCTTCAATGAAGGATTGGCGAGGGGGAAGAGGAGCAGCTCAAAATATAATTCCAAGTTCAACCGGTGCTGCAAAGGCTGTTGGTAAAGTTCTTCCTGAACTAAATGGAAAACTTACTGGAATGGCATTTCGCGTACCTACTCCTAATGTTTCTGTCGTGGACTTAACCTGCCGTCTTCAAAAGAATGCCTCCTATGAAGATGTTAAGGCAGCAATAAAGCAAGCTTCAGAGGGACAATTGAAGGGAATTCTTGGATACACAGATGAGGATGTTGTCTCTAATGACTTCGTTGGTGATTCAAGGTCGAGTATCTTTGATGCTAAGGCCGGGATTGGGCTTAGCAAGTCCTTCGTGAAGCTGGTCTCGTGGTATGACAATGAGTGGGGTTACAGCAACCGAGTGTTGGACCTTGTAGGACACATGGCACTGGTGGGAGCACACAATTAA 1260 0.4302 MAASSILRSAIVASPCSSDRFQGLCNASSINSKSTRLQSSIFGTSILCDSLVLQNCNARSMQPIRATATEIPLPVQKSSSTGKTRVGINGFGRIGRLVLRVATSRDDIDVVAINDPFIDAKYMAYMFKYDSTHGPFRGTIKVLDDTTLEINGKQVKVVSKRDPVEIPWGDFGADYVIESSGVFTTLEKASSHLKGGAKKIIISAPSADAPMFVVGVNEKTYNPSMDIVSNASCTTNCLAPLAKVVHEEFGIIEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLQKNASYEDVKAAIKQASEGQLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSKSFVKLVSWYDNEWGYSNRVLDLVGHMALVGAHN* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3138 419 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC 1 417 - -
Tpr7g3138 419 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 192 205 IPR020831 GO:0016620
Tpr7g3138 419 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 227 245 IPR020831 GO:0016620
Tpr7g3138 419 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 254 270 IPR020831 GO:0016620
Tpr7g3138 419 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 311 328 IPR020831 GO:0016620
Tpr7g3138 419 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 351 366 IPR020831 GO:0016620
Tpr7g3138 419 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 231 238 IPR020830 GO:0016620
Tpr7g3138 419 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 85 407 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Tpr7g3138 419 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 238 395 IPR020829 GO:0016620
Tpr7g3138 419 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 85 185 IPR020828 GO:0051287
Tpr7g3138 419 Gene3D - 85 412 - -
Tpr7g3138 419 Gene3D Dihydrodipicolinate Reductase; domain 2 233 399 - -
Tpr7g3138 419 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 232 395 - -
Tpr7g3138 419 SMART gp_dh_n_7 84 233 IPR020828 GO:0051287
Tpr7g3138 419 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 84 253 IPR036291 -
Tpr7g3138 419 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 1 417 IPR020831 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3138 Tpr-Chr7 38874659 38880763 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3138 7 38874659 38880763 Tpr7g3138 7 38874659 38880763 ECH