Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3128 ATGATGACGACGGTGGCACTGAAGTTCGGTAGAAGAATGAACACGGCACTCCGATCATCGAATCTTCTCTATCGCTCTTCCTCTTCCTTTCTTCTCTCCGCTAACTTCCTCATTCAAATTCCCCTCACTCGCAAGATGAGCACGGATGCACATAATATTGCCTCCCAGCTTAACAGTTCGGGGTTGTTGAGGACTCAGGGCCTCATTGGAGGGAAATGGCAGGATGCTTATGATGGGAAAACCATAAAGGTTTATAATCCATCAACTGGCGAATCTATAGCAGATGTAGCATGCATGGGTGGAAGGGAAACAAATGATGCCATTTCCTCTGCTTTTGATGCATTTAAATCATGGAGCAAAACCACTGCTGCTGAGCGAAGTAAACTTCTGAGGAAATGGTATGATTTGCTAATGGCACACAAAGAAGAGTTAGCACAACTAATAACCTTGGAGCAAGGAAAGCCTCTTAAAGAGTCTCTGGGTGAGATAAATTACAGTGCTGGCTTTATTGAGTTTGCATCGGAGGAGGCAAAACGTATATATGGGGATATAATTCCCGCACCTCAATCTGATCGGAGGTTATTTGTTTTAAAGCAGCCTGTAGGGGTTGTAGGTGCAATTACACCTTGGAACTTTCCCCTTGCTATGATTACCCGAAAGGTTGGTCCAGCCCTTGCATGTGGATGTACAGTGGTCATAAAGCCCTCTGAACTTACACCTCTGACGGCTTTAGCTGCAGCTGAACTCTCTATTCAAGCTGGAATTCCTGCGGGTGTTGTAAACGTGGTTATGGGAAATGCTCCTGATATCGGAGACGCTTTAATCGCAAGTCCACAGGTAAGGAAGATTACATTCACTGGCTCGACGGCTGTTGGAAAGAAATTGATGGCAGGTTCTGCTGAGACGGTTAAAAAAGTATCTTTGGAACTTGGTGGCAATGCGCCTTGCATAGTTTTTGATGATGCTGACCTGGATGTTGCAGTGAAAGGAACACTTGCAGCAAAGTTCCGTAATAGCGGACAAACTTGTGTTTGTGCAAATAGAATTCTTGTGCAAGAAGGTATATATGACAAATTTGCAAATGCATTGCTTGAGGCTGTTCAGAGTATGAAAGTTGGAGATGGTTTTAGTGAAGGTGTGGCTCAGGGCCCTCTGATCAATGAAGCTGCTGTTAAAAAGGTTGATTCCTTGATTCATGAGGCTACATCAAAGGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATCAACTTTTTATGAACCAACAGTCATCACTGATGTAGACAATGACATGCTTATATCAAGACAGGAAGCATTTGGACCTGTCGCACCCCTTTTGAGATTCAAAACTGAAGAGGATGCTATCAGAATTGCTAATGACACTAATGCAGGCTTGGGTTCATACGTATTTACAAACAGTATCCAACGATCATGGCGTGTAGCCGAGGCTCTTGAATATGGACTTGTAGGTGTTAATGAAGGAGTAATTTCAACAGAGGTGGCTCCATTTGGTGGAGTTAAACAGTCTGGCCTCGGAAGAGAAGGTTCCAAATATGGGATGGATGAATATTTGGAGATCAAGTATGTCTGCTTGGGAAACATGAACAAAGATTGA 1623 0.4368 MMTTVALKFGRRMNTALRSSNLLYRSSSSFLLSANFLIQIPLTRKMSTDAHNIASQLNSSGLLRTQGLIGGKWQDAYDGKTIKVYNPSTGESIADVACMGGRETNDAISSAFDAFKSWSKTTAAERSKLLRKWYDLLMAHKEELAQLITLEQGKPLKESLGEINYSAGFIEFASEEAKRIYGDIIPAPQSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDALIASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRILVQEGIYDKFANALLEAVQSMKVGDGFSEGVAQGPLINEAAVKKVDSLIHEATSKGAKVILGGKRHSLGSTFYEPTVITDVDNDMLISRQEAFGPVAPLLRFKTEEDAIRIANDTNAGLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGNMNKD* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3128 540 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 336 347 IPR016160 GO:0016491
Tpr7g3128 540 Pfam Aldehyde dehydrogenase family 73 532 IPR015590 GO:0016491
Tpr7g3128 540 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 60 537 - -
Tpr7g3128 540 SUPERFAMILY ALDH-like 60 538 IPR016161 GO:0016491
Tpr7g3128 540 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 84 530 IPR010102 GO:0009013|GO:0009450
Tpr7g3128 540 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 308 315 IPR029510 GO:0016491
Tpr7g3128 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 79 526 IPR016162 GO:0016491
Tpr7g3128 540 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 60 537 - -
Tpr7g3128 540 CDD ALDH_F5_SSADH_GabD 84 534 - -
Tpr7g3128 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 312 501 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3128 Tpr-Chr7 38761240 38772399 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3128 7 38761240 38772399 Tpr7g3128 7 38761240 38772399 ECH