Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3121 ATGGGACATCGTTGTTGTAACAAACAGAAAATCAAAAGAGGATTATGGTCTCCTGAAGAAGATGATAAGCTTGTTACTTATATTACTACTCATGGACATAAAAGTTGGAGTTCTGTTCCAAAGTTTGCAGGATTACAGAGATGTGGTAAGAGTTGCAGATTAAGATGGACAAACTATTTGAGGCCAGATCTAAAGAGAGGTTCCTTCACCGTAGAAGAAGAACAAATCATAATTGATATACATAGAATTCTTGGAAACAGATGGGCCCAAATAGCAAAGCATCTACCTGGTAGAACCGACAATGAAGTGAAGAATTTTTGGAACTCATGCATTAAAAAGAAACTCATTTCTCAAGGCTTAGATCCAAACACTCACAATTTACTTTCTTCTTCTTCTCATCATAAGAGAAACAACTTATCATATCAAAATTCCAATTCCATTTTCATCCTTAGTTCACAAATGCCACTAAATACTAATAATCTCATTGAAACAACTCAAACTTTTGCTTCACTTCAAACTCCTTCCACATTTTCTCCCTCTAACCAATATCAAACATCTTTCAATGTAATATCAAATGATCAACTTTATGTTTCCGAGCAAGAACAACCTCGATCATTAACCGAGAACATATCGAACATGTGTTCTACTTCTTGCAATGAGAATAGCATTTGGGTTTCAAGAGATGATGATTTTAGAGATTCAACATTTGAAGAAGGAATTAAAGCTCAAGTTGAGAAAGAGAAGGAGAAGATATGTGATGAGAAAGGAATGAAGGACAAAGAAGTTAATAATGAGAAGGAAGATATCGAAATGAATAGTTGTTTTGAGAATTCTAACTTTGATTTTGGATTGTTGGAGAGTGTACTTAACTCTGAATTTATATCTCATGATCTAGATTATATGGATGAACTTGCATGGAACTTTTAG 927 0.3387 MGHRCCNKQKIKRGLWSPEEDDKLVTYITTHGHKSWSSVPKFAGLQRCGKSCRLRWTNYLRPDLKRGSFTVEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPNTHNLLSSSSHHKRNNLSYQNSNSIFILSSQMPLNTNNLIETTQTFASLQTPSTFSPSNQYQTSFNVISNDQLYVSEQEQPRSLTENISNMCSTSCNENSIWVSRDDDFRDSTFEEGIKAQVEKEKEKICDEKGMKDKEVNNEKEDIEMNSCFENSNFDFGLLESVLNSEFISHDLDYMDELAWNF* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3121 308 CDD SANT 68 108 IPR001005 -
Tpr7g3121 308 SMART sant 12 62 IPR001005 -
Tpr7g3121 308 SMART sant 65 113 IPR001005 -
Tpr7g3121 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Tpr7g3121 308 Gene3D - 10 66 - -
Tpr7g3121 308 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Tpr7g3121 308 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Tpr7g3121 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Tpr7g3121 308 PANTHER MYB DOMAIN PROTEIN 55 1 296 - -
Tpr7g3121 308 CDD SANT 16 60 IPR001005 -
Tpr7g3121 308 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Tpr7g3121 308 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Tpr7g3121 308 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Tpr7g3121 308 Gene3D - 67 144 - -
Tpr7g3121 308 PANTHER BNAC05G40480D PROTEIN 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3121 Tpr-Chr7 38658714 38660944 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr7g3121 Myb_DNA-binding 7.6e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3121 7 38658714 38660944 Tpr7g3121 7 38658714 38660944 ECH