Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3120 ATGGCTCCAATGACTCTACCACCTGGATTCAGGTTCCACCCTACAGATGAAGAACTTGTAGCTTACTACTTGGAAAGAAAAATAACAGGTAGAACTATAGAGCTTGATATCATTGCAGAAGTTGATCTCTACAAATGTGAACCATGGGATTTACCAGAAAAATCATTTCTTCCAAGCAAGGACATGGAGTGGTATTTTTATAGTCCAAGAGATAGAAAATATCCAAATGGATCAAGAACAAATAGAGCAACAAGAGGTGGTTATTGGAAAGCAACTGGAAAAGATAGGGCAGTGAATTCTCAAAAGAGACAAGTTGGAATGAAGAAGACACTTGTTTATTACAAAGGTAGAGCACCTCATGGGATTAGAACCAATTGGGTTATGCATGAATATCGTCTCATTGAATCACATCCTGGTGCTTCTCTCTCTTCTTTGAAGGATTCCTACTCGTTGTGTCGAATTTTCAAAAAGACAATTCAAATCCCAACAAAAAATAATGAGGAACAAGTTGAAGAAACAAAGAAGGAAATGATGTTAGAAGAACAAGTGCAAGGGGAAGACTCAAGTGGCACTGAAAATTCAAGAGAAATAATGGAAACTATGGATAAAAAAATTCTTAATCAAGATGAACATCCAAAATTTCTATGTGATGCTTCTTCTTCTGATGTCACTCAAGGAACATGTACACCAACAAATACATGTAATAATAATATAACCGATGATTTTCATGCACAATTTGCTTGTGATGAAGCAAATAGTTCAGCTATTTCTTATCCAATTGGAATTGGCTACCCCTCAAACTTATTTCAGGATATAGAAATACCTATGTATGGTGGTTTCCATAATCAATTTCCACAAACACCTTTTATGATTGAAGATTTTCCACAAATTGAGACAAAGTCAATATTGAAGCCAGATATGACTAATGATGACTGCTTTTTGTATGACAAATATAGAGACTGTATGAATGGAACACTAGAAGAAATCATCTCTTTATGTTCCTCTCAAGATCATTCTTTGGCTTTTCCTATGCTATAG 1038 0.3516 MAPMTLPPGFRFHPTDEELVAYYLERKITGRTIELDIIAEVDLYKCEPWDLPEKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRAVNSQKRQVGMKKTLVYYKGRAPHGIRTNWVMHEYRLIESHPGASLSSLKDSYSLCRIFKKTIQIPTKNNEEQVEETKKEMMLEEQVQGEDSSGTENSREIMETMDKKILNQDEHPKFLCDASSSDVTQGTCTPTNTCNNNITDDFHAQFACDEANSSAISYPIGIGYPSNLFQDIEIPMYGGFHNQFPQTPFMIEDFPQIETKSILKPDMTNDDCFLYDKYRDCMNGTLEEIISLCSSQDHSLAFPML* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3120 345 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 198 - -
Tpr7g3120 345 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Tpr7g3120 345 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Tpr7g3120 345 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Tpr7g3120 345 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Tpr7g3120 345 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3120 Tpr-Chr7 38651811 38656844 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g3120 NAM 4.3e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3120 7 38651811 38656844 Tpr7g3120 7 38651811 38656844 ECH