Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3110 ATGTGTAGCTCCAAAGCTAAAGTAACTGTTGGCATAGAATCTTCCACAACACCATCTCATCATGGAAGGCCAGTTCTTCAACCAACATGTAACCATGTTGTTCCAAATCTTGAAAGAAGAAACTCAATTAAGAAATTAACACCAAAATCACTTTCACCACTTCCACTTCCAAACAAGACTTCTACTACTACTTATACTACTACTTCATTGACACCACCAATTTCTCCTAAACCAAAATCACCTACTAGACCATTAGCTATAAAGAGAGGAAATGATAATAATGGAATGAATTTAAGCTGTGAAAAGCTTGTGATTCCTAAAAACATAATGAAAACTCCAAGTTTAGACAGGAAAAAATCAAAGAGTTTTAAAGAAGGGTCTTTTGGTATTGAAACTTCATTGAGTTATTCTTCCTCTTTGATCACTGACTCACCAGGAACCATAGCTGCAGGGAGAAGGGAACAAATGGCACTTCAACAGGCACAAAGGAAAATGAAGATTGCTCATTATGGAAGATCAAAGTCTGCTAAATTTGAAAGAGTTTTTCCTATTGATCCTTCCAATGTTTTGGATTCAAAGGTTACTAATGAAGAGGAGAAGAGATGCAGCTTTATCACAGCCAATTCAGATCCTATCTATATTGCTTATCATGATGAAGAATGGGGAGTTCCGGTTCATGATGACAAGATGTTGTTTGAACTTCTAATTTTAAGTGGTGCTCAAGTTGGATCTGATTGGACCTCAACCTTGAAAAAACGCCTAGATTTCAGGGCTGCATTTTCAGAATTTGATGCAGAAATTGTGGCAAACTTGACTGATAAGAAAATGATATCTATTAGTTCAGAATATGGCATTGAAATAAGCAAAGTTAGAGGAGTTGTTGATAATGCTAACCAAATTTTACAGGTAAAGAAAAGCTTTGGTTCATTTGACAAGTACATTTGGGGATTTGTGAATCATAAACCAATCTCAACTCAATACAAATTTGGCCACAAGATTCCTGTGAAGACATCAAAATCAGAGACCATAAGCAAAGACATGATTAGGAGAGGTTTTAGGTTTGTTGGTCCAACAGTTGTTCATTCATTTATGCAGGCAGCTGGCCTAACAAATGACCACTTAATCACTTGCCACAGGCACTTGCAATGCACCTTAATGGCACCTATTTAA 1170 0.365 MCSSKAKVTVGIESSTTPSHHGRPVLQPTCNHVVPNLERRNSIKKLTPKSLSPLPLPNKTSTTTYTTTSLTPPISPKPKSPTRPLAIKRGNDNNGMNLSCEKLVIPKNIMKTPSLDRKKSKSFKEGSFGIETSLSYSSSLITDSPGTIAAGRREQMALQQAQRKMKIAHYGRSKSAKFERVFPIDPSNVLDSKVTNEEEKRCSFITANSDPIYIAYHDEEWGVPVHDDKMLFELLILSGAQVGSDWTSTLKKRLDFRAAFSEFDAEIVANLTDKKMISISSEYGIEISKVRGVVDNANQILQVKKSFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSETISKDMIRRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTLMAPI* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3110 389 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 387 - -
Tpr7g3110 389 SUPERFAMILY DNA-glycosylase 200 383 IPR011257 GO:0003824|GO:0006281
Tpr7g3110 389 Gene3D Hypothetical protein; domain 2 199 381 - -
Tpr7g3110 389 MobiDBLite consensus disorder prediction 56 73 - -
Tpr7g3110 389 PANTHER OS04G0501200 PROTEIN 1 387 - -
Tpr7g3110 389 MobiDBLite consensus disorder prediction 1 21 - -
Tpr7g3110 389 Pfam Methyladenine glycosylase 207 380 IPR005019 GO:0006284|GO:0008725
Tpr7g3110 389 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3110 Tpr-Chr7 38507917 38511002 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3110 7 38507917 38511002 Tpr7g1458 7 16150232 16153712 PCT