Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g3088 ATGATGCAAGGAAGTGGAGAATTGACAGTTCCTCCAGGGTTCAGGTTCCACCCTACTGATGAGGAGCTTCTTTACTATTATCTAAGGAAGAAAGTTTCTTATGAAGCCATTGATCTTGATGTTATTAGAGAAGTTGATCTCAATAGACTTGAGCCTTGGGATCTCAAAGATAAGTGTAGGATTGGATCAGGGCCACAAAATGAATGGTATTTCTTCAGCCACAAGGACAAGAAATACCCAACAGGAACAAGAACAAATAGAGCAACAACAGCTGGGTTTTGGAAAGCAACAGGAAGGGACAAAGCCATATATCACACCAATTCCAAAAGGATTGGAATGAGGAAAACTTTAGTCTTTTACACTGGACGTGCTCCTCATGGCCATAAAACTGATTGGATCATGCATGAGTACCGTCTTGATGATGATGATACTGCTGAAGTTCAGGAAGATGGATGGGTGGTATGTAGGGTATTCAAAAAGAAAAACACAACCAGAGGCTACCAACAAGAAATTGAAGAAGAAGATCACATAATTAACCACATGAGATCAACAAATAATCAAAACCATTTTCTTGAGCCAAAACATCAACATCATCACCACATGCAACAATTAGGACTATATGATTACAACAATAACACCACCTTTGATGGTACAATTCATCTACCACAATTATTCAGTCCAGAATCATCAGCACTAGCACCGCCACCACCACCGCCACCAACTTCCTTTCATAATTCATCAATGGATATTCTTGAATGTTCTCAAAACTTGTTGAGACTCACAACAACTACTCCTAATCTCATGCAACAACATCAAGGAGAAAGGTTGAATATCAATGGTGGTGATTGGTCATTCTTGGATAAACTACTTGCATCTCATAATGGAATGGATCATAATCTAAGAAACAAATTATGTAACACTTCTAATAATCATCAAGCTGCAGCTGCTTCTGTTGGATCAACTTCTGCTCAGAAATTTCCATTTCATTACCTTGGTTGTGAGCCTCATGATATTATGAAATTTTCAAAGTAA 1032 0.3828 MMQGSGELTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNRLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGHKTDWIMHEYRLDDDDTAEVQEDGWVVCRVFKKKNTTRGYQQEIEEEDHIINHMRSTNNQNHFLEPKHQHHHHMQQLGLYDYNNNTTFDGTIHLPQLFSPESSALAPPPPPPPTSFHNSSMDILECSQNLLRLTTTTPNLMQQHQGERLNINGGDWSFLDKLLASHNGMDHNLRNKLCNTSNNHQAAAASVGSTSAQKFPFHYLGCEPHDIMKFSK* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g3088 343 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Tpr7g3088 343 Coils Coil 341 343 - -
Tpr7g3088 343 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 315 - -
Tpr7g3088 343 Gene3D NAC domain 19 165 IPR036093 GO:0003677|GO:0006355
Tpr7g3088 343 PANTHER PROTEIN SOMBRERO 6 315 - -
Tpr7g3088 343 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
Tpr7g3088 343 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g3088 Tpr-Chr7 38159786 38165032 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g3088 NAM 7.4e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3088 7 38159786 38165032 Tpr7g3088 7 38159786 38165032 ECH