Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2955 ATGGCTGAAGAAGTTAGAAAAGATGAAGAGAATATTAATAATCAAGGGATTAAGCTATTTGGCACAACAATAAAACTACATGGTGAGGAATCAAAAGAAGGAGAAAAAGAAAGCGAAGATCGGACGGTGGAGAAGCGATCAGAAAAGATCATACCGTGTCCAAGATGCAAAAGCATGGAAACTAAATTCTGTTATTTCAATAACTACAACGTTAATCAACCAAGACATTTTTGTAAGGGCTGTCAGAGATATTGGACAGCTGGTGGGGCCCTCCGTAACGTACCGATTGGAGCCGGTCGTCGGAAGGCCAAGCCGCCGGGTCAAGAGGATAGCGGATCACCGGATAGTTGTGTATATGAAGCTGGTTCCGATGATGGGAATAAGTGGCACGTTGACACGACTCCTCGGAGTGATTTCCGGGAAGTTTTCTCCGGTAAGCGGCAGAGGGTGACCTCTGGTGGTGGTTATTCGTTAGCCTTGTGA 483 0.4555 MAEEVRKDEENINNQGIKLFGTTIKLHGEESKEGEKESEDRTVEKRSEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPGQEDSGSPDSCVYEAGSDDGNKWHVDTTPRSDFREVFSGKRQRVTSGGGYSLAL* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2955 160 MobiDBLite consensus disorder prediction 125 145 - -
Tpr7g2955 160 ProSitePatterns Zinc finger Dof-type signature. 53 89 IPR003851 GO:0003677|GO:0006355
Tpr7g2955 160 ProSiteProfiles Zinc finger Dof-type profile. 51 105 IPR003851 GO:0003677|GO:0006355
Tpr7g2955 160 MobiDBLite consensus disorder prediction 25 45 - -
Tpr7g2955 160 PANTHER CYCLIC DOF FACTOR 2 12 153 IPR045174 GO:0003700|GO:0006355
Tpr7g2955 160 Pfam Dof domain, zinc finger 49 104 IPR003851 GO:0003677|GO:0006355
Tpr7g2955 160 MobiDBLite consensus disorder prediction 23 45 - -
Tpr7g2955 160 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 12 153 - -
Tpr7g2955 160 MobiDBLite consensus disorder prediction 96 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2955 Tpr-Chr7 36856601 36857447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2955 13 154 C2C2-Dof Transcription Factor Family AT1G29160 51.786 1.49e-50 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Tpr7g2955 zf-Dof 5.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g2955 - - vra:106779806 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g2955 7 36856601 36857447 Tpr7g2955 7 36856601 36857447 ECH