Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g2043 ATGAGTCGATCGATCGAGCAGCCTCCTCCGCCGCCGCCGTCGCCGTTGCTGTCCGATCATTCATTTCAGACTTCTAACTCAAGGAGTGTGTTTTCTGGGAGTAGTTCTCATCGCTTCATGGACCCTGACGTGATCGAAATTCCACCACCACCAACTCATAATAAGCCTTCTAATTTGTTGAAGCAGAAGAAAGAGGCCATTGTTCCGGATGTGATTGACATCGACAACGATGAGGATTCATCAGATTTAGTGTTAGTTGGTGAAAAAGTTGTTAAGATGAATAAGGGGAAGACCATTGAATCCGTTCACAATGGTTATGGTGATCATCAAACTATGGAAGACTTTGATAATATATATTTTCCATCTGTGATTGACAAATCTGGACCAAGTAGCAGGGTCGAGTCTTCCAACGGTTATACTTCTGTATCAAATAATGTAATCAACATTGATGGGGATGGTTCTGACCACTCATATGATGATGATGGTGATGATGTTGATGACTTCTCTGATCTTTTTATGGATGATTACATGGACGTAGATAATTATACTTTACTACAGGAGCATTTTGATAATGCGAATATACCTCCTGGTATTGAGGCACCTGTTCCTTGGTTGAAAGAATATGATCTAGGTTCAAATAAGAATGAAAGTAGTTTATTCTATCCTAGCTTGCATATTCCGCAATCTGATTCTAAAAATTCTCAAGTTAGTGGCTTTTTTCAGCCTACATGGCCATTAGAGCCTATTAAGCCTGAAATTCAAGGACCTACTGAAAGTAATTCTAGTGTGCAAAATAAAATCGTATGTGTTGATCATATTTCCAAATTAGAATTACCTTCTCAGTTATTTTCTCAATCTGTCCCCAGTAAGAAAAAATTCGATTTCACACAGAGCAGGAGACGCAAGTTAAAGTTGGCATTAGGAGCGGAGTCATCTACATCTAATTTATTTTTAGGACCTTCTGGTAAAAAGAAGCCTTATGTTTTTGATTCTTCAACTAACTTTAGCTCTTTAGACAACTCAGCGGCCATGAAGCTGCCACATGGAGGTGAGTCACCACATTGGAAACTACTTGAAAGTGCAAAGAAAGCAGCTGCAACTGCAAGTCTTGGTTCACATCATTCAAATTTCTTTGGACCTGTAGATGGACCATTTCCTTTTCCGGGAACTGATTTTGTAAATCCTTGGTTGAGTTCTTCTCATTTTAATCCATATCCAAGTTATACAGCTAATCCAGGTTTTTTTAATCCATTTGTTCCTCTTCATGCCACACCTGAGCAACTGTTCAATAACCCTTGGGTTCACAATTCTGCAAAAGATGGAAATAATGGCACAACCGCTGATAGTACTGTCGTGACCATCTCTGATGAAGTCAGAGATGAAATTCTGAAGAAATTTCAAAACTTTAAGCAATTTGACACTATTGATGACACATCAGACCATTACTTTGTTCGCACCAACTCTTCCATGACGCAGCATTCAAAGAATTGGGTTAAAAGAATTCAGGAAGAATGGAAGTTACTGGAGAAGGATTTACCAGATTCAATATTTGTCAGAGTTTACGAATCGAGAATAGATCTGTTGAGGGCTGTGATTATTGGAGCAGAGGGAACTCCTTATCATGATGGCCTTTTCTTTTTTGATGTTTTCTTTCCCAGTGGCTTTCCTAATGTACCTCCGCAAGTCTACTACCACTCTGGTGGACTTCGACTCAACCCAAATTTATATAATTGTGGCAAAGTGTGCCTTAGTCTACTTAACACCTGGTCTGGCAATAAAAATGAGAAGTGGCTCCCAGGCGTTTCGACAATTTTACAGGTCCTGGTCTCCATACAAGGTCTAATCTTAAATACAAAGCCTTACTTTAATGAGCCTGGATATGCACGTCTGAGTGGTTCTGCAGAGGGTGAAATGAGATCCCTGCGGTATAATGAAGACACTTTTCTCTCATCATTGAGGACAATGGTTTATCTGATAAGAAGGCCTCCAAAGAGTTTCGAGGACTTCGTTAAAGGTCACTTCTGCAGCCGAGCTCAGGATATTCTGGTGGCTTGTAAAGCATACATGGATGGTGCTCAAGTTGGCTGTTTGGTCAAAGGTGGGGTTCAGGATGTTGATCAGGGTGACAAGAGCTGCTCAAAGGAGTTTAAGAATTCTTTAGCTGCATATGTGGATATGCTTGTTAAAGAGTTTACACAAGTTGGAGCCAGGGACTGTGATAAATTCTTGTCTTCATCAACGGTAAGCAACAAGCCGTCGGAATAA 2265 0.4022 MSRSIEQPPPPPPSPLLSDHSFQTSNSRSVFSGSSSHRFMDPDVIEIPPPPTHNKPSNLLKQKKEAIVPDVIDIDNDEDSSDLVLVGEKVVKMNKGKTIESVHNGYGDHQTMEDFDNIYFPSVIDKSGPSSRVESSNGYTSVSNNVINIDGDGSDHSYDDDGDDVDDFSDLFMDDYMDVDNYTLLQEHFDNANIPPGIEAPVPWLKEYDLGSNKNESSLFYPSLHIPQSDSKNSQVSGFFQPTWPLEPIKPEIQGPTESNSSVQNKIVCVDHISKLELPSQLFSQSVPSKKKFDFTQSRRRKLKLALGAESSTSNLFLGPSGKKKPYVFDSSTNFSSLDNSAAMKLPHGGESPHWKLLESAKKAAATASLGSHHSNFFGPVDGPFPFPGTDFVNPWLSSSHFNPYPSYTANPGFFNPFVPLHATPEQLFNNPWVHNSAKDGNNGTTADSTVVTISDEVRDEILKKFQNFKQFDTIDDTSDHYFVRTNSSMTQHSKNWVKRIQEEWKLLEKDLPDSIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGFPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGNKNEKWLPGVSTILQVLVSIQGLILNTKPYFNEPGYARLSGSAEGEMRSLRYNEDTFLSSLRTMVYLIRRPPKSFEDFVKGHFCSRAQDILVACKAYMDGAQVGCLVKGGVQDVDQGDKSCSKEFKNSLAAYVDMLVKEFTQVGARDCDKFLSSSTVSNKPSE* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g2043 754 Pfam Ubiquitin-conjugating enzyme 500 620 IPR000608 -
Tpr7g2043 754 SMART ubc_7 499 656 - -
Tpr7g2043 754 Gene3D Ubiquitin Conjugating Enzyme 455 736 IPR016135 -
Tpr7g2043 754 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 60 747 - -
Tpr7g2043 754 SUPERFAMILY UBC-like 485 663 IPR016135 -
Tpr7g2043 754 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 496 656 IPR000608 -
Tpr7g2043 754 CDD UBCc 498 625 IPR000608 -
Tpr7g2043 754 MobiDBLite consensus disorder prediction 1 58 - -
Tpr7g2043 754 MobiDBLite consensus disorder prediction 18 36 - -
Tpr7g2043 754 MobiDBLite consensus disorder prediction 1 17 - -
Tpr7g2043 754 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 60 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g2043 Tpr-Chr7 25453535 25459204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g2043 446 739 Miscellaneous Gene Families AT2G33770 49.324 3.17e-86 290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g3537 7 43942984 43946462 Tpr7g2043 7 25453535 25459204 PCT