Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1702 ATGAAAACACTAGCAGTTAATACTGAAGATTCTTTTTCCAGTTTATTGGAGTTTGCTTCTAACAATGACATTGAAGGTTTTAAGTTGCTTTTAGATAAAGAAGGAGCTTCTTCAATTAACAAGGCGGGGATTTGGTACGGTCGGCAATATGGGTCTAAGCAGATTGCTCTTGACCATAAAACATCTTTGATGGTCGCTTCTACTTATGGTAGTATTGATGTTATAAAGCTTATAGTTTCGTATCCGGAAGCCGATGTGAATTTTGCTTGTGGTGTGAGTAAAATGACTGCCCTTCATTGTGCTGCTTCTGGTGGGTCTGTTAATGTTGTTGATGCTGTGAGACTTCTTATATTGGCTGGTGCTGATGTTAATTGTGTCGATGCCAATGGAAATCGGCCTGTTGATGTCATTGTTGTTCCTCCCAAGCTGCAAAGCATGAAATCAGTTCTTGAGGAACTTCTTTTGTATAATGCCTCTGATAATGGCTCTATTGGTGACTTCTCTGTTTCAGTGTCTGTTAATTCTTCTAGTTCTGGTTTGCTTGATAATGGGATGACTTTGCCATACTCCCCCTCAGTGTCGCCGCCATCTCCTGTAGTGGGTTCGAAGTTTACGGAGAAGAAGGAATATCCAGTTGATCCATCACTTCCTGGTATAAAAAACAGCATATACGCAAGTGATGAGTTTCGAATGTATTCTTTCAAGGTCCGTCCTTGTTCCCGTGCATACTCTCATGATTGGACTGACTGTCCATTTGTTCATCCTGGAGAGAATGCTCGGAGGAGAGACCCTAGGAAGTTCCATTACAGCTGTGTGCCTTGCCCTGAATTTAAGAAAAGGTCGTGTACGCGTGGAGATATGTGTGAATATGCTCATGGAGTATTTGAAAGCTGGCTACACCCAGCTCTGTATCGAACACACCTCTGTAACGACGGTACTAGTTGTAATCGAAGGGTGTGTTTTTTTGCTCATGTTGCAGAGGAATTGAGGCCATTGCATCCGTCAACTGGATCTGCGATTTCTTCACCGCGTTCATCCGGATCTGCTCTTAATGTGATGGACATAGCTGCTGCAATGAATCTTTTTCCTGGTTCACCCTCGTCAGTCTCTTCTATGTCTCCATCTCATTTTGCCCAGCCGATGTCCCCTTCTGGAAATTGCATGTCATTCTCAAGTGCAGCCTGGGCACAGCAAAATGTTCCAACTCTTCATTTACCGGGAGCTAATTTTCAATCTAGTCGATTGAGATCTTCTCTTAGTGCTCGTGACATTCCACCCGAAGACTTCAATGTGCTTAGCAATTTTGATTGCCAGCAGCACCTTTTGAATGACTTGAGCTGTTCCGCACAGCCCCGTCCTGGTTCTTGTTGGTCTAAGGCACTAAATCCATCAAATCATGAAGAGCTCTTTTCTGCTGAAATTTTGTCATCTCCACAGTATTCTGACCAATCAATGGCTTCTGTTTTTTCACCTTCACGTAAATCAGTTGCTATGAACCATTTTAACCAGCTTCAAAACATGTTATCACCTACAAATACTAATATGTTGTCTCCAAAAAATGTTGAGCAACCTATGTTACAGGCTTCATTTGGCGTCCCTTTTTCAGGTAGGATGTCACCTAGAAGTATGGAACCAATCTCCCCAATGGGCCCTCGAATGTCTCCATTTGGTCAGCGCGAGAAACAGCTGCGGAGTATTAGCTCAAGGGACCTTGGTTCCAACATCCCTGCCTCAGTTGTTGGATCTCCTACAAACCCACGATCTAAGTGGGGATCTCCTAATGGGATGGTTGATTGGTCGGTAAATGGAGATGAACTTAGTCGCCAATGGGATGGTTGA 1839 0.435 MKTLAVNTEDSFSSLLEFASNNDIEGFKLLLDKEGASSINKAGIWYGRQYGSKQIALDHKTSLMVASTYGSIDVIKLIVSYPEADVNFACGVSKMTALHCAASGGSVNVVDAVRLLILAGADVNCVDANGNRPVDVIVVPPKLQSMKSVLEELLLYNASDNGSIGDFSVSVSVNSSSSGLLDNGMTLPYSPSVSPPSPVVGSKFTEKKEYPVDPSLPGIKNSIYASDEFRMYSFKVRPCSRAYSHDWTDCPFVHPGENARRRDPRKFHYSCVPCPEFKKRSCTRGDMCEYAHGVFESWLHPALYRTHLCNDGTSCNRRVCFFAHVAEELRPLHPSTGSAISSPRSSGSALNVMDIAAAMNLFPGSPSSVSSMSPSHFAQPMSPSGNCMSFSSAAWAQQNVPTLHLPGANFQSSRLRSSLSARDIPPEDFNVLSNFDCQQHLLNDLSCSAQPRPGSCWSKALNPSNHEELFSAEILSSPQYSDQSMASVFSPSRKSVAMNHFNQLQNMLSPTNTNMLSPKNVEQPMLQASFGVPFSGRMSPRSMEPISPMGPRMSPFGQREKQLRSISSRDLGSNIPASVVGSPTNPRSKWGSPNGMVDWSVNGDELSRQWDG* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1702 612 Gene3D - 268 331 - -
Tpr7g1702 612 ProSiteProfiles Ankyrin repeat profile. 93 128 IPR002110 GO:0005515
Tpr7g1702 612 SMART ANK_2a 93 125 IPR002110 GO:0005515
Tpr7g1702 612 SMART ANK_2a 58 88 IPR002110 GO:0005515
Tpr7g1702 612 SMART ANK_2a 10 41 IPR002110 GO:0005515
Tpr7g1702 612 Pfam Ankyrin repeats (3 copies) 19 127 IPR002110 GO:0005515
Tpr7g1702 612 ProSiteProfiles Ankyrin repeat region circular profile. 93 127 - -
Tpr7g1702 612 SMART c3hfinal6 303 326 IPR000571 GO:0046872
Tpr7g1702 612 SMART c3hfinal6 268 294 IPR000571 GO:0046872
Tpr7g1702 612 Gene3D - 3 172 IPR036770 -
Tpr7g1702 612 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 1 608 - -
Tpr7g1702 612 PANTHER UNKEMPT FAMILY MEMBER 1 608 IPR045234 -
Tpr7g1702 612 ProSiteProfiles Zinc finger C3H1-type profile. 273 295 IPR000571 GO:0046872
Tpr7g1702 612 MobiDBLite consensus disorder prediction 560 612 - -
Tpr7g1702 612 MobiDBLite consensus disorder prediction 567 591 - -
Tpr7g1702 612 SUPERFAMILY Ankyrin repeat 7 149 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1702 Tpr-Chr7 19462431 19465827 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr7g1702 Ank_2 1.4e-08 CL0465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1702 7 19462431 19465827 Tpr3g4535 3 50485454 50490484 PCT