Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1697 ATGGAGTCAGAAAGGGAAGCTGGGGGAAAACCAATGACAGCATTGAGTGCTCAAGTATGCAAGATATGTGCTGAAAATGTCGGCAAGACTTACAATGGTGAACCATTCATTGCATGCCATGTTTGTGCTTTTCCTGTTTGTAGGCTATGCTATGAGTATGAAAGGAAGGAGGGGGATCAGTCTTGTCCTCAGTGTAAAACTCGGTACAAGAGGCATAAAGGAAGTCCTGCAATTACTGGCGACAGTGAAGAAGATGATGGTTCTAGTGCCTTCAATTATGCAGATCTTGAAGAGCTTGGCCGTCCAAATTATGAAAAGGAAGTTTCGCACAACCATATTCCACAGCTGTCTAGTGGACAAGAGTTGTCTGGAGAATTTTCTGCAGCTTCACCTGAGAGGCTCTCAATGTTATCTCCTTTAGGTGGTGGGGGGAAGCGCATCCACAATCTTCCATATTCATCCGATGTTAATCAATTTCAAAATGTGAGGGCTGTGGACGCAGGATTAGGCAATGTAGCGTGGAAAGAAAGAGTTGATGGTTGGAAGATGAAGTCAGAAAAGAGTGTTGCTCCAACAATGAGCACAGGCCTAACTGCTTCCGAAAGAGGGACTGGAGATATGGATGCAAGATCTGATGTGCTTATTGATGATTCCTTGTTGAATGATGAAGCTCGGCAACCTCTTTCCAGGAAGGTTTCTATTCCGTCATCTAGGATAAATCCATATCGCATGGTCATTGTTCTGCGACTGGTTGTCCTTTGCATTTTCTTGCATTATCGAATAACAAATCCAGTGCGCAATGCACATGCGTTGTGGTTGGTATCAGTTATATGTGAGATTTGGTTCGCGATATCCTGGATATTGGATCAATTCCCTAAGTGGCTTCCTGTCAACCGTGAAACGTATCTCGACAGACTTTCACTGAGATATGATCGGGAAGGAGAACCATCTCAGCTAGCGGCTGTTGACATTTTTGTCAGTACCGTCGACCCGTTAAAAGAGCCTCCACTTGTGACTGCAAATACTGTGCTATCTATTCTTGCAGTTGACTACCCTGTGGATAAAGTCTCCTGCTATGTCTCTGACGACGGTGCCGCTATGTTGACATTTGAAGCTCTTGCTGAGACATCAGAGTTCGCGAGAAAATGGGTTCCTTTTACCAAAAAGTATAGTATTGAACCCCGTGCACCTGAGTGGTATTTTGCGCAGAAGATTGACTACTTGAAGGATAAGGTTGAAACGTCATTTGTCAAGGATCGTAGAGCAATGAAGAGAGAATACGAAGAATTTAAAATTCGTATTAATAGACTTGTTGCTAAGGCAACGAAAGTTCCCGAAGAAGGGTGGGTAATGCAAGATGGTACGCCATGGCCTGGAAATAACGTCAGAGATCATCCAGGAATGATTCAGGTTTTCTCAGGCCAAAGTGGAGGACTTGACACTGACGGCAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGTTTCCAACATCACAAGAAAGCCGGTGCCATGAATGCACTTGTTCGAGTATCCGGCGTCCTTACTAATGGACCTTTCATATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCAATAAGGGAAGCTATGTGCTTTATGATGGATCCTAATCTTGGTAAACATGTTTGCTATGTCCAGTTTCCGCAGAGGTTTGATGGTATTGATAGGAACGATCGATATGCCAATCGTAATACTGTTTTCTTCGATATAAACTTGAGAGGTTTGGATGGTATTCAAGGTCCTGTTTATGTTGGTACTGGATGTGTCTTCAATAGAACGGCTTTATATGGTAATGAACCTCCTCTAAAACCGAAGCATAAAAAGAAGAGTTCAAAATTTAGTAAGAAAGCGTCTAGCAGGCATACTGACTCAACTATCCCCATCTACAGTCTAGGGGATATGGAAGGTGTAGAAGGTACTGGATTTTCAGGGACTGGATTTTCAGGTAGTGGATTTGATGATGAGAAAACACTACTTACGTCACAAAAGAGCCTTGAGATGCTTCAGAATAGATTCGGTCAGTCAATTGTTTTTGTTGTTTCAACGGAGATGGAGAATGGTGGTGTTCCTCAGTCTGCAACTCCAGAAACTCTTCTGAAGGAGGCTATTCATGTTATCAGCTGTGGTTATGAGGATAAATCAGAATGGGGAACAGAGATAGGATGGATTTATGGTTCTGTCACGGAAGATATTCTTACTGGATTTAAGATGCATGCTCGTGGTTGGCGGTCTATATACTGCATGCCTAAGCGGCCAGCATTTAAAGGTTCTGCTCCTATCAATCTTTCAGATCGTCTAAACCAAGTGCTTCGATGGGCTTTAGGTTCAGTTGAAATTCTTTTTAGCCGACATTGTCCCATCTGGTATGGTTATGGTGGAAGGCTAAAGTGGCTCGAGAGGTTCGCGTATATTAACACCACAATCTATCCGGTCACTGCCATTCCCCTTCTTATGTATTGTACCTTGCCAGCTGTCTGTCTTCTTACTAACAAGTTCATCATTCCACAGATTAGTAACCTAGCAAGTATATGGTTTATTTCTCTCTTTCTTTCAATCTTCGCAACTGGAATCCTCGAGATGAGATGGAGCGGTGTTGGAATCGACGAGTGGTGGAGAAACGAACAATTTTGGGTTATCGGTGGCGTGTCAGCACATCTTTTTGCTGTATTCCAAGGTCTACTAAAAGTGCTTGCTGGAATCGACACAAACTTCACCGTCACCTCAAAAGCCTCAGACGAAGATGGAGACTCTGCAGAACTCTACATGTTCAAATGGACAACCCTTCTCATTCCGCCAACAACACTTCTGATAATTAACTTGGTCGGAGTTGTTGCTGGTATTTCCTATGCTATTAACAGCGGTTATCAATCGTGGGGTCCTCTCTTTGGTAAACTTTTCTTTGCATTTTGGGTTATAGTTCATCTTTACCCTTTCCTTAAAGGTCTCATGGGTCGCCAGAATCGAACACCGACCATTGTTGTGGTCTGGTCGATTCTTCTTGCGTCGATTTTCTCTCTATTGTGGGTTCGAGTTGATCCGTTTACCACAAGAGTCACTGGTCCTAAAGCTGAGGTGTGTGGAATTAACTGCTAA 3135 0.4319 MESEREAGGKPMTALSAQVCKICAENVGKTYNGEPFIACHVCAFPVCRLCYEYERKEGDQSCPQCKTRYKRHKGSPAITGDSEEDDGSSAFNYADLEELGRPNYEKEVSHNHIPQLSSGQELSGEFSAASPERLSMLSPLGGGGKRIHNLPYSSDVNQFQNVRAVDAGLGNVAWKERVDGWKMKSEKSVAPTMSTGLTASERGTGDMDARSDVLIDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVVLCIFLHYRITNPVRNAHALWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLSLRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFTKKYSIEPRAPEWYFAQKIDYLKDKVETSFVKDRRAMKREYEEFKIRINRLVAKATKVPEEGWVMQDGTPWPGNNVRDHPGMIQVFSGQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSGVLTNGPFILNLDCDHYINNSKAIREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGNEPPLKPKHKKKSSKFSKKASSRHTDSTIPIYSLGDMEGVEGTGFSGTGFSGSGFDDEKTLLTSQKSLEMLQNRFGQSIVFVVSTEMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYINTTIYPVTAIPLLMYCTLPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDSAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPKAEVCGINC* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1697 1044 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 441 612 IPR029044 -
Tpr7g1697 1044 SUPERFAMILY Nucleotide-diphospho-sugar transferases 336 856 IPR029044 -
Tpr7g1697 1044 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 92 IPR013083 -
Tpr7g1697 1044 MobiDBLite consensus disorder prediction 110 125 - -
Tpr7g1697 1044 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 1044 - -
Tpr7g1697 1044 Pfam Zinc-binding RING-finger 10 86 IPR027934 -
Tpr7g1697 1044 CDD mRING-HC-C4C4_CesA_plant 18 68 - -
Tpr7g1697 1044 PANTHER CELLULOSE SYNTHASE 5 1044 - -
Tpr7g1697 1044 Coils Coil 420 440 - -
Tpr7g1697 1044 MobiDBLite consensus disorder prediction 614 635 - -
Tpr7g1697 1044 MobiDBLite consensus disorder prediction 110 129 - -
Tpr7g1697 1044 Pfam Cellulose synthase 322 1038 IPR005150 GO:0016020|GO:0016760|GO:0030244
Tpr7g1697 1044 SUPERFAMILY RING/U-box 5 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1697 Tpr-Chr7 19415393 19422694 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1697 7 19415393 19422694 Tpr7g1697 7 19415393 19422694 ECH
Tpr7g1697 7 19415393 19422694 Tpr3g4542 3 50577398 50584568 PCT