Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1694 ATGCCAGGGAAACCTGAAACCGATGATTTGGCAGTAAAGCATAGTGAGTTGCCATCTTCCATTTACTCACATCAGCCTTGGTGGCTTGAAAATGCCTCCAAATCAAGCTCAGCTGATCAGCTAAATGGTTCAATCATGAATGGTGTAACAGATTTAGAGGCTAATGAAAGACAGCATTTGGTTTCGCCTTCACTTTATGTAACTGATAAGTCAGGTGGGGACGTTGTCAAGGAGCAGCAAAACATCAAACACGCCCTGTCCTCAACTCCATTTACCATGGACAAACACCTTGATGGTCATTCAATTGTTTTAACATCCCCTTATTCAAATGCAGAGTTTGGTCAAATCTTAACAACTTATGGACAACAAGCTATGATGAACCCCCAGCTATACCAAATGCATCATGCTAGAGTGCTTTTGCCACTTGAAATGGAAGAGGAACCTGTCTATGTCAATGCAAAGCAGTATCATGGTATTTTGAGGCGAAGACAGTCGCGCGCTAAGGCTGAGCTCGAAAAGAAAGTTATTAAAGTTAGAAAGCCATATCTACACGAATCCCGTCACCTACATGCTTTGAGAAGGGCAAGGGGAAATGGCGGTCGCTTTCTCAATACAAAGAAGCTCGAACATAAAGATTCTCATGCCGCTCTAGAAAAAGACAACAATACTGGTACAACACTGGTTACCAACAAGGAGAATCAAGGCTCATCTAATGCGTCACAGTCCGTGCACAAAATGCAGGGTTTCAACATCGGTTACTGTGCTGGAAATGGCTTTACAGCTCTATGTCATTCACAGGCAAATGGAAAACAGGAGAGTGACTTCTTTGGTAAAGAGAGGGAATCAAATGGTGGTATTAAATGA 864 0.4259 MPGKPETDDLAVKHSELPSSIYSHQPWWLENASKSSSADQLNGSIMNGVTDLEANERQHLVSPSLYVTDKSGGDVVKEQQNIKHALSSTPFTMDKHLDGHSIVLTSPYSNAEFGQILTTYGQQAMMNPQLYQMHHARVLLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKVRKPYLHESRHLHALRRARGNGGRFLNTKKLEHKDSHAALEKDNNTGTTLVTNKENQGSSNASQSVHKMQGFNIGYCAGNGFTALCHSQANGKQESDFFGKERESNGGIK* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1694 287 MobiDBLite consensus disorder prediction 211 242 - -
Tpr7g1694 287 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 147 202 IPR001289 GO:0003700|GO:0006355
Tpr7g1694 287 ProSitePatterns NF-YA/HAP2 subunit signature. 150 170 IPR018362 GO:0003677|GO:0016602
Tpr7g1694 287 Gene3D - 145 206 - -
Tpr7g1694 287 PANTHER TRANSCRIPTION FACTOR Y SUBUNIT A-1, PUTATIVE-RELATED 20 283 - -
Tpr7g1694 287 SMART cbf3 144 205 IPR001289 GO:0003700|GO:0006355
Tpr7g1694 287 MobiDBLite consensus disorder prediction 219 242 - -
Tpr7g1694 287 PRINTS CCAAT-binding transcription factor subunit B signature 148 170 IPR001289 GO:0003700|GO:0006355
Tpr7g1694 287 PRINTS CCAAT-binding transcription factor subunit B signature 179 202 IPR001289 GO:0003700|GO:0006355
Tpr7g1694 287 ProSiteProfiles NF-YA/HAP2 family profile. 145 205 IPR001289 GO:0003700|GO:0006355
Tpr7g1694 287 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 20 283 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1694 Tpr-Chr7 19375780 19379862 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Tpr7g1694 CBFB_NFYA 8.1e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g1694 7 19375780 19379862 Tpr7g1694 7 19375780 19379862 ECH