Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1689 ATGGCGGAACACGTGACCGCCACCGTGAACGACGGCGAACAAAAACCACAAAAGAACGAACACCACAACAACAACAAAGATAACAAGAAAGAGAAGAGTTCAGATCCAGAGCTATTCTGCTGTCTTCTTCAGCCTCTAACGCCTGACGCTGATCCCCGATACATCGGCATTCGTCGCCTCCTCCTTCATCAGAAGGCCGAGGCTGGGATTCTCCGCCGTAGGGATTGGCGATGCAATGGGAAAACTTACGTCGCATACCGGAATTACATATGCAGACCTAGGAACTGTGAAAGTCTACGAGCCCCAAGCCTTCAAAGTACTCCAGGAAACAGTGGCCGATGGATTCCATCTTCAAGTCCACTCCCCCGTTGGTCTGAGGTGGACAGCTGGGGTTCTGGGAGGGATGTCCAAGTTGCAAGTTCAGTATCCAATCGTAGATCAAGTTTTGGCTCTGCCTCAACTGCAAGTGATTCTGATCGTCCACGGCATCGTGGGGTTGAGCATGCCTATTCCTTTGTAGGAATGCATTGCATCTTTGACCAGTGCAAAGCCTCTGTTACGGTGTTAAAGTTTGGGCACAAGAGTTCTGACCTACTCGCTTATGGGGCATCAGATGGAACCTTGACTGTGTGCAGTGTTTCAGAGAAACCTTCAGTCATCAAACAATTAAGTGGCCATTCCAAAGATGTCACAGATTTTGATTTTACATCAAACAATCAGTACATTGCATCATCTTCGTTGGATAAAACTGTGAGAGTATGGGAGATAGAAAAAGGCATTTGCATACGGGTGATATATGGAGTTTCTTCACAACTGTGTATCCGTTTTCACCCTGTAAATAACAACTTCCTTTCTGTTGGCAATGAAAACAAAGAAATCAATGTATTCAATTTTAGCACTGGAAGGATAATTAACAAGTCGTTATTTGACGCTGGAGTTACCGCTATGGACCATGATCATACTGGTCATCTCATATTTTGTGGAGATGCACAGGGATGTATATACTCTGTAAATATGAACTCCCACACAGGTATATTATCCCGCTCTCATCGTCATCGAAGTAGCAGCAAACACAGATCTCCGGTAACAACAGTGCAGTATAGGAGTTTCTCTCTGCTGGCTCGAGGACCTGTGTTGTTGACCTGTACTCAGGATGGAAATCTGTCTTTCTTCAGTGTGGCTTTGGAGATAAAAGGCTATTTAACTCTTCGTTGCTCGCTCAAATTAACTCCTCGGATACACAAAATTCAAGCTTCTTTCTGCCCCCTTCTTTCTCTTGAAAAAGGAGAATTTATTGTTGCTGGCAGTGAGGACTCAAATGTCTATTTCTATGATTTAACAAAGCCAAAGCATACATGTGTAAACAAGTTACAGGGTCATCGGTTTCCTGTGATGGGGATTGCTTGGAACCAAGGAGAAAACTTTTTGGCTTCCTCTGATTTTTACGGCATAGTAATTGTATGGAAGAGAGAGAGAACAAATCAGAACAATAATACATAG 1500 0.44 MAEHVTATVNDGEQKPQKNEHHNNNKDNKKEKSSDPELFCCLLQPLTPDADPRYIGIRRLLLHQKAEAGILRRRDWRCNGKTYVAYRNYICRPRNCESLRAPSLQSTPGNSGRWIPSSSPLPRWSEVDSWGSGRDVQVASSVSNRRSSFGSASTASDSDRPRHRGVEHAYSFVGMHCIFDQCKASVTVLKFGHKSSDLLAYGASDGTLTVCSVSEKPSVIKQLSGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIEKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNENKEINVFNFSTGRIINKSLFDAGVTAMDHDHTGHLIFCGDAQGCIYSVNMNSHTGILSRSHRHRSSSKHRSPVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLTPRIHKIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMGIAWNQGENFLASSDFYGIVIVWKRERTNQNNNT* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1689 499 MobiDBLite consensus disorder prediction 101 120 - -
Tpr7g1689 499 Gene3D - 416 498 IPR015943 GO:0005515
Tpr7g1689 499 PANTHER WD REPEAT-CONTAINING PROTEIN 13 19 493 - -
Tpr7g1689 499 MobiDBLite consensus disorder prediction 1 33 - -
Tpr7g1689 499 PANTHER WD REPEAT PROTEIN 26-RELATED 19 493 - -
Tpr7g1689 499 ProSitePatterns Trp-Asp (WD) repeats signature. 242 256 IPR019775 -
Tpr7g1689 499 Gene3D - 270 415 IPR015943 GO:0005515
Tpr7g1689 499 Gene3D - 173 269 IPR015943 GO:0005515
Tpr7g1689 499 SMART WD40_4 172 212 IPR001680 GO:0005515
Tpr7g1689 499 SMART WD40_4 450 489 IPR001680 GO:0005515
Tpr7g1689 499 SMART WD40_4 300 338 IPR001680 GO:0005515
Tpr7g1689 499 SMART WD40_4 409 445 IPR001680 GO:0005515
Tpr7g1689 499 SMART WD40_4 348 392 IPR001680 GO:0005515
Tpr7g1689 499 SMART WD40_4 258 297 IPR001680 GO:0005515
Tpr7g1689 499 SMART WD40_4 216 255 IPR001680 GO:0005515
Tpr7g1689 499 ProSiteProfiles Trp-Asp (WD) repeats profile. 223 264 IPR001680 GO:0005515
Tpr7g1689 499 MobiDBLite consensus disorder prediction 14 33 - -
Tpr7g1689 499 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 223 259 - -
Tpr7g1689 499 ProSiteProfiles Trp-Asp (WD) repeats profile. 457 498 IPR001680 GO:0005515
Tpr7g1689 499 Pfam WD domain, G-beta repeat 220 254 IPR001680 GO:0005515
Tpr7g1689 499 Pfam WD domain, G-beta repeat 453 489 IPR001680 GO:0005515
Tpr7g1689 499 SUPERFAMILY WD40 repeat-like 184 491 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1689 Tpr-Chr7 19304155 19312404 Transposed