Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1687 ATGGAGTCCTCGGTTGATGTCTTACCAGCTAAACGCCCCGCTCCAATCGGAATTTCATCTGAGGAAGGATGCAAAAGACGTAAGTTATCAAGTGATAGTATGCCCAATTCAGCAAATGTGAATGTTGTAAATTACGCAAACCCGTATGCAATTTCAGAGGCTATAAATCGTTTAGAGAGTGGAAAATTCGGAAGCGTCACAAAGGATATTGAAGCCCTTATAACCCGAAAAATGAAAATACTGGGCCCTTACTTTGCAAAGTATCCTACACTTGTTGATAAGTTATTGAAGGTGGTGGTGCTAAATCATGATGAAAAAACTCACAACACGGAATATAAAAAAGTTACTGGTATGTCGCATCAAAATGTCATTGATTTGAATGAAAAGGATGTTTTGGCACCAAAAAGAGAAAAGGATGCACCTACCACACCAGTTCCTGTTGTTATCATTGATTCAGACGATGAAGATGATACGAATCAAAATTCATTTCTTCCATTTCATGAAGTTGTGTTGCCGCAACCAGCTCCGTCTCCTGCATTAAGAATGACCGGCTATCATGCTTCCAATGCTTACCATGGAGAAAGTGCAGATCTAAAATTTGATACAAGTATGCTTCCTTATGCTTACCATGGAGAAAGTGCAGATAAAAAATTTGAAACAAGCCTGCCTCCTAAAGATAACCCAAAGAAAGATAAAGGTGTTTATGTTGGTGTACCTGAGGAAGACGATCAGGTTGACGCTGAAGATGATGGGCTAGATGATATTTGGAGGGAGATGTCCATGGCAATAGAAACTTCTAAAGACATTTCTGCAGATCCTCAACCCGAAGAAGAAGAAGGGGAAGAAGATGCTGACTGTGATCATTCTTTCGTTTTAAAAGACGATATTGGATATGTTTGCCGTGTTTGTGGCGTTATTGACAGAGGAATTGAAACCATATTTGAGTTTCAATACAAGGTTAAAAGGAGCACAAGGACTTATATGTCTGATTCATCGAATGCCAAAGAAAAATTTGATGCGTTTGGTGTGAAGATTAAAGAAGATGATCTTGTGGTAACTGATATATCAGCACATCCTCGGCATGCGAATCAAATGAAACCGCACCAAGTCGAAGGCTTCAACTTTCTTGTCAGAAACTTGGCGGGGGACCATCCTGGGGGATGCATCCTGGCTCATGCTCCAGGATCTGGAAAGACTTTCATGATAATCAGTTTCATGCAAAGTTTTCTAGGAAAGTATCCTAATGCCAGACCTCTAGTGGTGCTTCCCAAGGGAATATTGTCAACTTGGAAAAAAGAGTTTCAGACATGGCAAGTGGAAGATATTCCGCTTTATGACCTATACACTGTGAAGGCAGATAGTAGACCTCAACAACTAGAGGTGTTAAAACAATGGATGGATAACAAGAGTATCCTTTTCTTAGGATACAAACAGTTTTCTTCCATTGTGATTGATAATAGTAATAACAATGCATCGATAGCTTGCCGGGATATATTGCTCAAGGTTCCCTCAATTCTCATTTTAGATGAGGGACACACTCCAAGAAATGAGAATACTGATATGGTACAGTCCCTTGCCAAAGTACTAACACCAAGGAAAGTTGTACTGTCTGGAACCCTTTATCAAAATCATGTCAGGGAGGTATTCAACGTTCTCAATCTGGTGCGGCCGAAGTTTTTAAAGATGGAAACATCTAAGCCAATTGTCCGGCGCATTCAGAGTAGGATCCATATAAGTGGCGTTAAGCGCTTCGATGAATTGGTCGAGAATACATTGCAGAAGGATCCAGATTTTAAAAGGAAAGTGGCTGTAATTCATGATTTGCGTGAGATGACCAGCAAAGTTCTTCACTACTATAAAGGAGATTTTCTTGATGAGCTTCCTGGCCTTGTAGATTTCACTGTGGTGCTCAAACTTACACCTAGACAGAAGCATGAAGTTGAGAAAGTAAGGAAGATATTAAGAAAGTTCAAAATGTCTGCTGTAGGCAGTGCAGTGTATTTGCACCCTAAGTTGATGCCACTTGCAGATAAATGTGTTGAAAAATCGGTTCTTCAAAAACAAAAATGCGTTGAAAGATCCATATCGGATAATATAATGGATGAATTTATAGCAAACCTAGATGTTAGAGATGGGGTCAAATCAAAATTCTTTCGCAATATGCTGAATCTATGTGAATCAGCTGGGGAGAAACTTTTGGTGTTCAGTCAATATCTCTTGCCTTTGAAATATTTGGAAAGGTTAGCTGTGAAGTGGAAGGGATGGGGTGTCGGAAGAGAAATCTTTGTGATTTCAGGAGATTCAACTGCCGAAGAAAGGGAGTATTCCATGGACAAGTTTAACAATACACCCGAGGCAAAAATATTTTTTGGGTCAATCAAAGCCTGTGGTGAGGGTATATCGTTGGTTGGGGCATCCCGTGTCATCATCTTGGATGTTCATTTAAACCCATCTGTTACTCGTCAAGCTATTGGCCGTGCTTTCCGGCCAGGCCAGAAAAGAAAAGTCTTTGTGTATCGATTGGTAGCTGGTGATTCTCCAGAAGAGGAAGATCACAATACTTGTTTCAAGAAGGAATTAATTTCAAAAATGTGGTTTGAATGGAATGAATATTGTGGTGACAGAGCTTTTGAAGTAGAGACTCTTGAAGATGTGAAGGAATGTGGTGATCTGTTTCTGGAAAGTCCATTTTTAGGGGAAGATGTAAAAGCTCTGTATAAAAGGTAG 2727 0.3993 MESSVDVLPAKRPAPIGISSEEGCKRRKLSSDSMPNSANVNVVNYANPYAISEAINRLESGKFGSVTKDIEALITRKMKILGPYFAKYPTLVDKLLKVVVLNHDEKTHNTEYKKVTGMSHQNVIDLNEKDVLAPKREKDAPTTPVPVVIIDSDDEDDTNQNSFLPFHEVVLPQPAPSPALRMTGYHASNAYHGESADLKFDTSMLPYAYHGESADKKFETSLPPKDNPKKDKGVYVGVPEEDDQVDAEDDGLDDIWREMSMAIETSKDISADPQPEEEEGEEDADCDHSFVLKDDIGYVCRVCGVIDRGIETIFEFQYKVKRSTRTYMSDSSNAKEKFDAFGVKIKEDDLVVTDISAHPRHANQMKPHQVEGFNFLVRNLAGDHPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDLYTVKADSRPQQLEVLKQWMDNKSILFLGYKQFSSIVIDNSNNNASIACRDILLKVPSILILDEGHTPRNENTDMVQSLAKVLTPRKVVLSGTLYQNHVREVFNVLNLVRPKFLKMETSKPIVRRIQSRIHISGVKRFDELVENTLQKDPDFKRKVAVIHDLREMTSKVLHYYKGDFLDELPGLVDFTVVLKLTPRQKHEVEKVRKILRKFKMSAVGSAVYLHPKLMPLADKCVEKSVLQKQKCVERSISDNIMDEFIANLDVRDGVKSKFFRNMLNLCESAGEKLLVFSQYLLPLKYLERLAVKWKGWGVGREIFVISGDSTAEEREYSMDKFNNTPEAKIFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKRKVFVYRLVAGDSPEEEDHNTCFKKELISKMWFEWNEYCGDRAFEVETLEDVKECGDLFLESPFLGEDVKALYKR* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1687 908 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 21 908 IPR044567 GO:0080188
Tpr7g1687 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 352 574 IPR027417 -
Tpr7g1687 908 Pfam SNF2-related domain 385 594 IPR000330 GO:0005524|GO:0140658
Tpr7g1687 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 504 869 IPR027417 -
Tpr7g1687 908 MobiDBLite consensus disorder prediction 265 285 - -
Tpr7g1687 908 SMART helicmild6 746 831 IPR001650 -
Tpr7g1687 908 CDD SF2_C_SNF 714 842 - -
Tpr7g1687 908 Pfam Helicase conserved C-terminal domain 722 830 IPR001650 -
Tpr7g1687 908 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 717 883 IPR001650 -
Tpr7g1687 908 Gene3D - 332 593 IPR038718 -
Tpr7g1687 908 SMART ultradead3 361 571 IPR014001 -
Tpr7g1687 908 Gene3D - 628 892 IPR027417 -
Tpr7g1687 908 PANTHER PROTEIN CHROMATIN REMODELING 35 21 908 - -
Tpr7g1687 908 MobiDBLite consensus disorder prediction 215 235 - -
Tpr7g1687 908 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 379 558 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1687 Tpr-Chr7 19269379 19277264 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Tpr7g1687 SNF2_N 5.6e-19 CL0023