Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1673 ATGAATACACCTTCCTTTCTAACCTTGTTTTCCATTTGTTTAGTTTTTTCTTTCTCTCATGCTCTAAACAATGGTTTTAGTGTTGAACTTATTCATCGTGACTCTCCAAAATCACCACTTTACAAGCCCACACAAAATAAGTATGAACATATTATCAATGCTGCACGTCGTTCCATCAACCGTGCCAATCATTTGAACAAAGTTTCCCTCACAGCAAGTACACCTGAATCAACTGTAATCCCCGATGGCGGTGAGTATCTCATGACCTATTCAGTTGGTACCCCTCCATTTAAGTTATACGGTGTTGCTGATACCGGTAGTGACATTGTTTGGCTTCAATGTGAACCTTGTGACCCATGTTTCAACCAAACATCTCCGAAATTTAATCCATCAAAGTCATCATCTTACAAAAACATTTCTTGTTCATCTGACCTATGTCAATCCGTAAGAGATTCCTCTTGTAATAGCGATAATTGTCAATATACTATTAAATACGGTGATGGATCACATTCTGAAGGAGCTCTTAGTCTTGAAACTCTTGCATTGGAATCCACTACTGGTCGTCCTATTTCGTTTCCTAAAACTGTGATAGGATGTGGAACAGATAATACAATGTCGTTTGAAGGTCAAAGCTCTGGTATAGTTGGCCTTGGTGGTGGACCAGTGTCTCTTATAACACAATTGGGGTCTTCAATTGGTGGAAAATTTTCTTATTGCTTGTTGCCATCATCCTTCCGTGAGTCAAACACGACGACCAAACTCAATTTTGGAGATGCCGCTGTGGTTTCAGGAGATGATGTTTTGTCAACTCCTATAGTGAAAAAGAATCCAGCAGTTTTCTACTATTTGACATTGGAATCAATGACTGTTGGAAACAAAAGATTCAAATACGGAGGATCATTTTTGGGTGATTCAGAGGAGGGTAACATCATAATTGATTCAGGTACAACTTTGACGCTTTTACCATCTGACGTTTATAGCAATTTGGAATCAGCCGTTTCAGAAGTGGTGAAACTAAATCGTGTTGACAGTCCTATTCAACAATTAAACCTTTGCTATAGTCTTACATCAGACAACTATGATTTTCCTATAATCACGGCACACTTTAAAGGCGCTGATGTTAAGTTGCTTCCTATTAATTCTTTTGTTGCTGTTGCTGATGGTGTTGTTTGCTTAGCTTTTACACCAACTCAGAGGTTACCCATCTTTGGAAATATAGCTCAACAAAATTTCTTGATTGGTTATGACATTCTACAAAAAACTGTGTCCTTTAAGCCAATTGATTGTAGCAAAGTTTAA 1299 0.3803 MNTPSFLTLFSICLVFSFSHALNNGFSVELIHRDSPKSPLYKPTQNKYEHIINAARRSINRANHLNKVSLTASTPESTVIPDGGEYLMTYSVGTPPFKLYGVADTGSDIVWLQCEPCDPCFNQTSPKFNPSKSSSYKNISCSSDLCQSVRDSSCNSDNCQYTIKYGDGSHSEGALSLETLALESTTGRPISFPKTVIGCGTDNTMSFEGQSSGIVGLGGGPVSLITQLGSSIGGKFSYCLLPSSFRESNTTTKLNFGDAAVVSGDDVLSTPIVKKNPAVFYYLTLESMTVGNKRFKYGGSFLGDSEEGNIIIDSGTTLTLLPSDVYSNLESAVSEVVKLNRVDSPIQQLNLCYSLTSDNYDFPIITAHFKGADVKLLPINSFVAVADGVVCLAFTPTQRLPIFGNIAQQNFLIGYDILQKTVSFKPIDCSKV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1673 432 Pfam Xylanase inhibitor C-terminal 281 425 IPR032799 -
Tpr7g1673 432 Pfam Xylanase inhibitor N-terminal 86 258 IPR032861 -
Tpr7g1673 432 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 310 321 IPR001969 GO:0004190|GO:0006508
Tpr7g1673 432 Gene3D Acid Proteases 257 432 IPR021109 -
Tpr7g1673 432 ProSiteProfiles Peptidase family A1 domain profile. 86 425 IPR033121 -
Tpr7g1673 432 CDD pepsin_A_like_plant 85 429 IPR034161 -
Tpr7g1673 432 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 7 430 - -
Tpr7g1673 432 Gene3D Acid Proteases 64 256 IPR021109 -
Tpr7g1673 432 PANTHER OS07G0603500 PROTEIN-RELATED 7 430 - -
Tpr7g1673 432 SUPERFAMILY Acid proteases 79 430 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1673 Tpr-Chr7 19076269 19077567 Dispersed/Tandem