Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1665 ATGGCATTGAGTAATCCACTCTTTGATGCTATACGGAGTAACAGTGATGTTGATCCTCCTCAAATTGAAGAGTCAATAGATGTTGGTGAATTGATTAATGATCCTGCACAAACTGCTCCTAAACCTGCTGAAATTTTAAGCAGTGTTCGTGATCTTTTAGATTGTCCTGTATGCCTGAATCCCATGTACCCTCCAATTCATCAGTGTTCAAACGGTCATACTATATGTACAGATTGCAAACCCAGGGTACATAACCGGTGCCCTACTTGTAGGCATGAGCTGGGAAATATTAGATGTCTAGCATTGGAGAAGGTGGCTTCATCTTTTGCACTCCCTTGTAAATACAAAGCTTTTGGGTGCATCGGAATATATCCATACTACGACAAGTCAGAACATGAATCTCAATGTTCATATAGACCTTATAACTGTCCATATGCTGGTTCCCAATGCTCTATTGTGGGTGATATATCCTATCTGGTGAACCATTTGAAAGAAGATCACAAAGTGGACATGCACAATGGTAGCACTTTTAACCATCGTTATGTCAAATCAAATCCTCATGAAGTAGAAAATGCCACATGGATGTTAACGGTTTTCAGCTGTTACGGTCAGTACTTTTGTCTACATTTTGAAACTTTTCAACTTGGAGCTGCTCCTGTCTACATAGCCTTTTTGCGGTTTATGGGTGATGATAGCGAAGCAAAAAAGTATAGCTACAGTCTTGAGGTAGGCGGAAATGGGAGGAAGATGGTTTGGCAAGGAGTGCCAAGAAGCATCAGGGAAAGCCACTCCAATATTCGGGACAGTTTTGATGGACTCATTATTCAGAGGAATATGGCACTCTTCTTTTCAGGTGGTGACCGGAAAGAGTTGAAGCTAAGGGTTACCGGTAGGATCTGGAAAGAGCAATGA 912 0.4145 MALSNPLFDAIRSNSDVDPPQIEESIDVGELINDPAQTAPKPAEILSSVRDLLDCPVCLNPMYPPIHQCSNGHTICTDCKPRVHNRCPTCRHELGNIRCLALEKVASSFALPCKYKAFGCIGIYPYYDKSEHESQCSYRPYNCPYAGSQCSIVGDISYLVNHLKEDHKVDMHNGSTFNHRYVKSNPHEVENATWMLTVFSCYGQYFCLHFETFQLGAAPVYIAFLRFMGDDSEAKKYSYSLEVGGNGRKMVWQGVPRSIRESHSNIRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1665 303 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 164 296 IPR008974 GO:0005515
Tpr7g1665 303 ProSiteProfiles Zinc finger RING-type profile. 55 91 IPR001841 -
Tpr7g1665 303 PANTHER E3 UBIQUITIN-PROTEIN LIGASE DIS1 14 303 - -
Tpr7g1665 303 CDD RING-HC_SIAHs 53 91 - -
Tpr7g1665 303 SUPERFAMILY RING/U-box 47 95 - -
Tpr7g1665 303 ProSiteProfiles Zinc finger SIAH-type profile. 108 168 IPR013010 GO:0008270
Tpr7g1665 303 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 14 303 - -
Tpr7g1665 303 Pfam Seven in absentia protein family 97 296 IPR018121 GO:0005737|GO:0006511|GO:0007275
Tpr7g1665 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 163 IPR013083 -
Tpr7g1665 303 SUPERFAMILY TRAF domain-like 111 300 - -
Tpr7g1665 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 107 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1665 Tpr-Chr7 18931761 18936232 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4713 3 52064964 52069364 Tpr7g1665 7 18931761 18936232 PCT