Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1660 ATGGAGTCTTTAGTTCTTAAACTCCATGAAATCTCAGCTGTCAAATTTGGAAACTTCAAGCTCAAATCCGGCATCTCCTCACCAATTTACATAGACCTTCGCCTTGTTATATCTTACCCTTCTGTCCTCCGGCAAATTTCTCAAACTATGATTTCTTCTGTCTCGGACACTAAATTTGACCTTGTCTGTGGTGTCCCTTATACCGCTCTTCCTATTGCCACTTGTGTGTCTGTCACGCACAACATCCCTATGGTCATGCGCCGCAAAGAAATCAAAGACTATGGCACTTCTAAAGCCATTGAAGGTGATTTTAAGCATGGGCAAAGTTGCTTGGTAATCGAGGATTTAGTTACTAGTGGCACATCGGTTTTGGAAACTGCTGCACCGTTGCGTGACATAGGGTTGAAGGTCAGTGATGCTGTTGTTTTGATTGATAGAGAACAAGGTGGAAGAGAGAATTTGGAGAGTAATGGAATCAAGTTGCATGCCATTCTTAAATTGACTGAAATGGTCAAAATTTTGAGAGAAAAAGGAAGACTTGATGAGGAGATGGTTCGGGTTGTTATGAGATTCTTACAAGAAAATCAGAAGGTTGCTGCTTTGGAAAATACAAGGAAGGTCAAGAAGGTATTGTCGTATTTGGAGAGGGCTAAATTGTCCAAGAATCCAATGGGAAAGAGGTTGTTTGACATAATGGCGGCGAAGGAAAGTAATCTGTGTTTTTCTGCAGATGTTGGGACTGCAGCTGAATTGCTTGAAATTGCTGATAAGGTTGGTCGTGAGATATGTTTGCTGAAAACCCATGTGGATATCTTTCCAGATTTTACTCCGGATTTTGGCTCAAAGCTTCGTGCGATTGCAGAAAAACACAACTTCTTAATATTTGAGGATCGTAAGTTTGCCGACATTGGTAACACAGTGACCATGCAGTATGAAGGAGGGATTTTTCATATATTGGATTGGGCTGATATAGTAAATGCTCACATTATCTCTGGTCCTGGAATTGTGGATGGACTGAAATTAAAGGGTTTGCCTCGTGGAAAGGGTTTGTTGCTACTTGCTGAAATGAGTTCAGCTGGTAACCTTGCCAAGGGAGATTATACTGCTGCTGCAGTAAAAATTGCTGAGGATCATTCTGACTTTGTTATTGGCTTCATCTCGGTCAATCCAGCATCGTGGTCTGGGGCACCGATAAATCCTTGTTTCATTCAAGCAACTCCTGGTGTTCAAATGGTGATCGGTGGTGATGGTTTGGGGCAGCAATATAATACTCCTTATTCTGTTATCCATGATAGGGGTAGTGACATTATTATAGTGGGGCGTGGCATCATCAAGGCAGCGAATCCGGCTGCGGCAGCTCGTGAATACCGTCTTCAAGGATGGAGTGCATATTTGGACAAGTGCAAGTAA 1410 0.4241 MESLVLKLHEISAVKFGNFKLKSGISSPIYIDLRLVISYPSVLRQISQTMISSVSDTKFDLVCGVPYTALPIATCVSVTHNIPMVMRRKEIKDYGTSKAIEGDFKHGQSCLVIEDLVTSGTSVLETAAPLRDIGLKVSDAVVLIDREQGGRENLESNGIKLHAILKLTEMVKILREKGRLDEEMVRVVMRFLQENQKVAALENTRKVKKVLSYLERAKLSKNPMGKRLFDIMAAKESNLCFSADVGTAAELLEIADKVGREICLLKTHVDIFPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQYEGGIFHILDWADIVNAHIISGPGIVDGLKLKGLPRGKGLLLLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWSGAPINPCFIQATPGVQMVIGGDGLGQQYNTPYSVIHDRGSDIIIVGRGIIKAANPAAAAREYRLQGWSAYLDKCK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1660 469 Gene3D Aldolase class I 209 469 IPR013785 -
Tpr7g1660 469 SUPERFAMILY Ribulose-phoshate binding barrel 212 466 IPR011060 -
Tpr7g1660 469 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 294 307 IPR018089 GO:0004590|GO:0006207
Tpr7g1660 469 TIGRFAM pyrF: orotidine 5'-phosphate decarboxylase 239 457 IPR014732 GO:0004590|GO:0044205
Tpr7g1660 469 CDD PRTases_typeI 58 166 IPR000836 -
Tpr7g1660 469 Pfam Phosphoribosyl transferase domain 51 152 IPR000836 -
Tpr7g1660 469 SUPERFAMILY PRTase-like 3 190 IPR029057 -
Tpr7g1660 469 SMART OMPdecase_2 238 456 IPR001754 GO:0004590|GO:0006207
Tpr7g1660 469 CDD OMP_decarboxylase_like 239 445 - -
Tpr7g1660 469 Gene3D - 1 208 IPR029057 -
Tpr7g1660 469 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 1 469 - -
Tpr7g1660 469 TIGRFAM pyrE: orotate phosphoribosyltransferase 8 169 IPR004467 GO:0004588
Tpr7g1660 469 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 237 456 IPR001754 GO:0004590|GO:0006207
Tpr7g1660 469 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 225 IPR023031 GO:0004588|GO:0006221
Tpr7g1660 469 PANTHER PHOSPHORIBOSYLTRANSFERASE, OROTIDINE 5-PHOSPHATE DECARBOXYLASE 1 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1660 Tpr-Chr7 18888338 18891880 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4714 3 52071204 52075123 Tpr7g1660 7 18888338 18891880 PCT