Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g1659 ATGCTAGAGATGTCTTCACCACATCGAAATTCTGATACTAAAGATGTATCAGGTCCACACAAAAGACTATCAAGTCTGATGCATCAAGCTGGAAACAAGTTTTGCGCCGATTGCGGAACTCCAGAGCCAAAATGGGTATCTTCAAGTCTTGGAGTATTTATTTGCATAAAGTGTTCGGGTGTACATAGAAGTCTAGGAGTCCACATATCAAAGGTTGCATCATTGAAGCTAGATCAATGGACAGATGAACAAGTTGATGCATTAGAGAAGTTAGGTGGAAATACACTGTTAAATAAAAAGTATGAAGCTTTCCTCCCAAGTCATATAAAAAAACCAAAACCACATACCTCGATCGAAGAGCGCTCCGAGTATATCAGGAAAAAATATGAACAATTACTATTCATGGAGTGCGACGACAATGCAGCATGCGCAATTGTACCAGCTCAACAAGGAAGAAGTTTATCATTGTTTCAGAGTGGTTCTTCATGTTACACTTTTCATATGGACCAGAAAAAATACGACAAAGCCCCGACAAAACATCGTATTGGACATGCATTTCGAAATAGTTGGGCAAGAAAAGATTCCGAGCACAAGTCTTCTTCAAAGAAGAGTACCTCATTGGCAGGTATGGTTGAATTTGTAGGGTTGATTAAGGTTAATGTTGTGAAAGGCACTCACTTGGCTGTTAGAGATGTAATGACCAGTGACCCTTATGTGATCCTTTCTTTGGGACACCAATCTGTAAAAACGCGCGTTATAAAGAACAATTTGAATCCAGTTTGGAATGAAAGTCTAATGCTATCAATTCCAGAAAACATTCCTCCCCTTAAAGTGCTAGTGTATGATAAAGATACATTTTCAACTGATGATTTTATGGGTGAGGCTGAAATAGACATTCAACCACTTGTTTTAGCTGCAATTGCATATGAAAAATCTTCAAGCAATGAGCCCATGCAGTTTGAGAAATTTGTAGCAAGCAAGAACAACAGTCTTGTTAGAGATGGTACCATATCCCTTGATGAAGGAAAGATCAAACAAGAAATCTCAGTGAGGCTACAGAATGTTGAGAGAGGTGTTCTTGAAATTGAGCTTGAGTGTGTTCCTCTTACTCAATAG 1116 0.3871 MLEMSSPHRNSDTKDVSGPHKRLSSLMHQAGNKFCADCGTPEPKWVSSSLGVFICIKCSGVHRSLGVHISKVASLKLDQWTDEQVDALEKLGGNTLLNKKYEAFLPSHIKKPKPHTSIEERSEYIRKKYEQLLFMECDDNAACAIVPAQQGRSLSLFQSGSSCYTFHMDQKKYDKAPTKHRIGHAFRNSWARKDSEHKSSSKKSTSLAGMVEFVGLIKVNVVKGTHLAVRDVMTSDPYVILSLGHQSVKTRVIKNNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVLAAIAYEKSSSNEPMQFEKFVASKNNSLVRDGTISLDEGKIKQEISVRLQNVERGVLEIELECVPLTQ* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g1659 371 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 12 371 IPR044518 GO:0005096|GO:0005543
Tpr7g1659 371 CDD C2_ArfGAP 214 358 - -
Tpr7g1659 371 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g1659 371 SMART C2_3c 216 311 IPR000008 -
Tpr7g1659 371 Gene3D C2 domain 213 369 IPR035892 -
Tpr7g1659 371 SMART arf_gap_3 21 142 IPR001164 GO:0005096
Tpr7g1659 371 Pfam C2 domain 216 302 IPR000008 -
Tpr7g1659 371 PRINTS HIV Rev interacting protein signature 32 51 IPR001164 GO:0005096
Tpr7g1659 371 PRINTS HIV Rev interacting protein signature 51 68 IPR001164 GO:0005096
Tpr7g1659 371 PRINTS HIV Rev interacting protein signature 72 93 IPR001164 GO:0005096
Tpr7g1659 371 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 12 371 - -
Tpr7g1659 371 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 212 305 IPR035892 -
Tpr7g1659 371 Gene3D Arf GTPase activating protein 3 142 IPR038508 -
Tpr7g1659 371 ProSiteProfiles ARF GTPase-activating proteins domain profile. 20 142 IPR001164 GO:0005096
Tpr7g1659 371 ProSiteProfiles C2 domain profile. 198 313 IPR000008 -
Tpr7g1659 371 CDD ArfGap 23 129 - -
Tpr7g1659 371 Pfam Putative GTPase activating protein for Arf 21 136 IPR001164 GO:0005096
Tpr7g1659 371 SUPERFAMILY ArfGap/RecO-like zinc finger 21 135 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g1659 Tpr-Chr7 18881311 18886733 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4716 3 52083357 52088007 Tpr7g1659 7 18881311 18886733 PCT